DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and nifk-1

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_497959.1 Gene:nifk-1 / 175614 WormBaseID:WBGene00011408 Length:307 Species:Caenorhabditis elegans


Alignment Length:83 Identity:20/83 - (24%)
Similarity:45/83 - (54%) Gaps:4/83 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KKSWHDMYKDSAWIFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRS 87
            ||....:|.    :.:...|:...|.:|:..|.|:|.|:.|.:.|:.:||..||:.::.::::..
 Worm    25 KKQLKKIYV----VKIKRIPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85

  Fly    88 TVLAVDNLNGIKILDRTL 105
            ..:|.:::||..:.::.|
 Worm    86 AEIAAESMNGYLMFEQRL 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 18/81 (22%)
nifk-1NP_497959.1 RRM_NIFK_like 33..106 CDD:409748 17/75 (23%)
half-pint <45..>249 CDD:130706 16/59 (27%)

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