DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and tiar-1

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_495121.1 Gene:tiar-1 / 173967 WormBaseID:WBGene00015943 Length:408 Species:Caenorhabditis elegans


Alignment Length:95 Identity:28/95 - (29%)
Similarity:45/95 - (47%) Gaps:5/95 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKI 100
            :||......:....|...|..:|:|.:..:|||:.|.||||:.|:.|..:.....|::.:||..:
 Worm   137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWL 201

  Fly   101 LDRTLRVDHVA-----DYKPPKENEKMDEE 125
            ..||:|.:...     ..||...|||..:|
 Worm   202 GRRTIRTNWATRKPGDQEKPSHYNEKSYDE 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 22/81 (27%)
tiar-1NP_495121.1 PABP-1234 47..>302 CDD:130689 28/95 (29%)
RRM2_TIA1_like 136..210 CDD:409789 22/72 (31%)

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