DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and sup-46

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_492677.1 Gene:sup-46 / 172881 WormBaseID:WBGene00045383 Length:454 Species:Caenorhabditis elegans


Alignment Length:103 Identity:33/103 - (32%)
Similarity:45/103 - (43%) Gaps:15/103 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKI 100
            ||:|...:.:....|..||...|::..:: .|..|.|||||.|.:.|......|.||..|||.::
 Worm   190 IFIANLAFNVGTDKLYEVFGMAGKITWMD-FRIDKEGKSKGVCVIQYTHPIEAVQAVSMLNGQRL 253

  Fly   101 LDRTLRVDHVADYKPPKENEKMDEETLRL-YMEGCAPK 137
            .||.|.|             |||.....| :.||..|:
 Worm   254 FDRNLVV-------------KMDRFDKELEHKEGGLPR 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 26/76 (34%)
sup-46NP_492677.1 RRM_SF 47..120 CDD:473069
PABP-1234 <70..>321 CDD:130689 33/103 (32%)
RRM2_hnRNPM_like 190..263 CDD:409820 27/86 (31%)
RRM_SF 387..452 CDD:409669
Blue background indicates that the domain is not in the aligned region.

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