DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and Cirbp

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_001366350.1 Gene:Cirbp / 12696 MGIID:893588 Length:176 Species:Mus musculus


Alignment Length:110 Identity:32/110 - (29%)
Similarity:53/110 - (48%) Gaps:15/110 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 MYKDSAWIFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYE---DQRSTVL 90
            |..|...:||.|..:...|..|..|||:||::..:.:::|.:|.:|:||.|:.:|   |.:..::
Mouse     1 MASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMM 65

  Fly    91 AVDNLNGIKILDRTLRVDHVADYKPPKENEKMDEETLRLYMEGCA 135
            |   :||..:..|.:|||...         |..:...|.|..|.|
Mouse    66 A---MNGKSVDGRQIRVDQAG---------KSSDNRSRGYRGGSA 98

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 27/86 (31%)
CirbpNP_001366350.1 RRM_CIRBP_RBM3 6..85 CDD:409883 25/90 (28%)

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