DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CdGAPr and arhgap32

DIOPT Version :9

Sequence 1:NP_001260600.1 Gene:CdGAPr / 35267 FlyBaseID:FBgn0032821 Length:1843 Species:Drosophila melanogaster
Sequence 2:XP_004916221.2 Gene:arhgap32 / 734056 XenbaseID:XB-GENE-1002474 Length:1995 Species:Xenopus tropicalis


Alignment Length:2053 Identity:530/2053 - (25%)
Similarity:803/2053 - (39%) Gaps:586/2053 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 PIQGAVP--PPK-PSRHMA---------VQPLNSKSCRFPKLEECAHFHYERVQLGPLSVQLLDD 155
            |:.|.:|  |.: |.|...         |:.|:.....||||.||||||||.|..|.:.:.|.:|
 Frog    80 PVPGEIPTMPTEIPLRSCGSTASMKVKNVKKLSFTKGHFPKLAECAHFHYENVDFGSIQLTLTED 144

  Fly   156 KSEHMGSSIASQSLGGDLPHSSLRSFSPESCWFIIRV-CPQRCEPFLIKRSFENMQLLDEMLHRC 219
            ::|...:...|:.|                 .|:::: |..|  .:::|||:|:.::||:.||.|
 Frog   145 QNEVSRNGCESKEL-----------------VFLVQIACQGR--SWIVKRSYEDFRVLDKHLHLC 190

  Fly   220 VYDRKISGLRNMEELAAELPSESDVE-------YAVAKYLERFSKIASDSLTCGTILTWLQLDNK 277
            :|||:.|.|       :|||....|:       ..:..||.|.|.||.:.:.||..|||:::|||
 Frog   191 IYDRRFSQL-------SELPRSDSVKDSPELVTQMLMAYLSRLSAIAGNKINCGPALTWMEIDNK 248

  Fly   278 GRRLPLADGETQRTINTPAVGAAYGVRRYQAQAPDEINIEVGDMISVIDMPSPAESIWWRGKKSH 342
            |..|.:.:   :.:||.||:.||:.::||.||||||::.||||::||||||....:.|||||.. 
 Frog   249 GNHLLVHE---ESSINVPAIAAAHVIKRYNAQAPDELSFEVGDIVSVIDMPPKELTTWWRGKHG- 309

  Fly   343 LQKSLYEVGFFPQSCVATIGDKVPRNF----PMP-APLVG-----------HLDASPTKP----- 386
                 ::|||||..||..|.||||::.    |.| :|..|           :|:....:|     
 Frog   310 -----FQVGFFPSECVELINDKVPQSMTNSVPKPVSPAHGMRPASWSYFPPYLEMDSLRPGTSCC 369

  Fly   387 -----------VLRKHGKLIAFFRSFILSRPSRRRLKQSGIYRERVFNCDLSEHLLNSGQDIPMV 440
                       |.|||||||.|.|:|:.||||:::|||.||.|||||.|||.|||||||||:|.|
 Frog   370 SEVLSHSQLSSVSRKHGKLITFLRTFMKSRPSKQKLKQRGILRERVFGCDLGEHLLNSGQDVPQV 434

  Fly   441 LRSCAEFIENYGVIDGIYRLSGITSNIQRLRRAFDEERVPDLGNPEMKQDIHAVSSLLKMYFREL 505
            ||||.||||.:|::|||||||||.||||:||..||.|::|||......||||.|.||.|:|||||
 Frog   435 LRSCTEFIEKHGIVDGIYRLSGIASNIQKLRHEFDSEQIPDLTKDVYIQDIHCVGSLCKLYFREL 499

  Fly   506 PNPLCTYQLYDNFVEAIQVKADEADERLRLMKETVLKLPPPHYRTLKYLAEHLYKVSQHHGRTGM 570
            ||||.|||||:.|.:|:....||  |||..:.:.:.:|||||||||::|..||.:::.:...|.|
 Frog   500 PNPLLTYQLYEKFSDAVSAATDE--ERLVKIHDVIQQLPPPHYRTLEFLMRHLSRLATYCSITNM 562

  Fly   571 TDKNLAIVWAPNLLRSPALES---GGVAALRGVGVQAVVTEYLIRNCHNIFDALDDHPARHSMVA 632
            ..||||||||||||||..:||   .|.||...|.:|:||.|:::.:...:|.     |...|::.
 Frog   563 HTKNLAIVWAPNLLRSKQIESACFSGTAAFMEVRIQSVVVEFILNHVEVLFS-----PKLSSVIR 622

  Fly   633 SATAAAANAAGGELRLESLTDCESLLVEQREQDQSLGVVERPKSL--STGGAKLISLEEAQERHS 695
            ......:                               :.|||||  |:...||:||||||.|  
 Frog   623 DGAGHTS-------------------------------LSRPKSLLVSSPSTKLLSLEEAQAR-- 654

  Fly   696 RVEGADLKQSLPISMLTSASSNAASNIGS-YIEVGGGPSSLPDKYHTVLSAPRSWQKRKP---DK 756
                            |.|..|:.....| |||||.||::|..::|||:..| |.:||.|   .|
 Frog   655 ----------------TQAQINSPVVADSKYIEVGEGPAALQGRFHTVIDFP-SERKRPPTKMKK 702

  Fly   757 TP--SWKSIF---------SRSQRQGNPDPGQKI-----------TTDVKDSVASRVSFVQASHA 799
            :|  ||:|.|         |.|:|:...:|.:.:           .:....|..|..|......|
 Frog   703 SPVGSWRSFFSIGKSSSSASMSKRKLQRNPSEPLEMKSMAFAGGRDSSTMRSAKSEESLSSLHAA 767

  Fly   800 HASKELTKHDKPKSIELLETTSNERDPKPMDLCIRSNSIDSLRTVGHSRSVSHDSYFDLLQSPQR 864
            ....:|.:..:|:|..  :..|...:...:|.|.|.||.|:|     .|....|....|:..|..
 Frog   768 DGESKLFRPRRPRSSS--DALSASYNGDLLDSCNRCNSYDNL-----PRDQDSDGDEGLIHVPAM 825

  Fly   865 GHMTTCPSRELS--ELG---LNFD------------REEPEMRIFSESESLVSSPRVGKENV--- 909
            ....:....|||  ::|   |:||            .|.|:  ||.:.:...|:   ||:.|   
 Frog   826 LSGRSPEDEELSPPDIGMASLDFDPMSFQCSPPQLESEGPD--IFFQLDICASN---GKDKVQSD 885

  Fly   910 ----------PPASGSATRRIMRARPEDFSSQTNSVNPSPK-KQPRLNLLSPSSAR-TMPPPPL- 961
                      .|.|....:.:......|.||.|:.|:.:.. .:..:..|||...| .:..||| 
 Frog   886 AQNLGGVSSSEPHSPFQEKVVSPFLSPDRSSSTDKVSKTTSFAEKVVQALSPKVGRKAVRSPPLT 950

  Fly   962 -------SAPGTASSSCGHESGGA----------ENCCKRYKLE-DQLCDIQFIDCGTPENVPTT 1008
                   |.|...|...|...|..          ||.....:.| :.:|  :.:|...|..:|.|
 Frog   951 ISEPVTISLPSRVSEMIGSMQGNTAASQSLIWYRENSLNSRETEMNYVC--KSVDANLPSLLPAT 1013

  Fly  1009 -------------------QQQFASVEVHPPPKPARANQSPISSSNGASVGSSSSSTRYSYPSVQ 1054
                               ::..|....|..|:|    .|.:......::..|:::...:|....
 Frog  1014 DPWSTVTPVITQWNPDGLQREDKAGPFTHGFPQP----NSDLEQVENFNLELSTTNVAAAYQKED 1074

  Fly  1055 LGAKRKEQQDAKERFSYQGTFTQPGQKQESSAPRPVHSTNNGATLRKPRVE--PVEDGQIKLHVP 1117
            ....|..|                 .|..||...|     .||:..:...|  ||....|   :|
 Frog  1075 TELSRANQ-----------------NKSHSSVSPP-----QGASASESPQELAPVSSVSI---IP 1114

  Fly  1118 TPTTPARSPRYSLLLCDTESSDNSSAVNTPQY----DMEP-------------LMLTSAMSG--- 1162
             |..|.::|...|.|...||:..:||...|.|    |:.|             |.|:..||.   
 Frog  1115 -PPPPPKNPARMLALALAESAQQASANKRPLYMQFMDLPPHPPPPSVLEDKPLLELSPKMSPEHL 1178

  Fly  1163 VSGVSSNVQQQQLLLGVDA--------SSSYLGSSHESLGQNINNHHDAEQRDMNALKRELSLDL 1219
            |||.::......::....:        ||..:.:.|.|   .:.||                   
 Frog  1179 VSGPATPATSPPVISNKTSPATPPSTTSSFSITTIHHS---PVKNH------------------- 1221

  Fly  1220 NPLQPRLPQPANRAATLPVKDQLQAAAAAMCSSPNNSN----------FTDNTSQSVTPSEYGYQ 1274
            :||..::|.......: |..:|:..:..:....|:.:|          ||  |...|||.....:
 Frog  1222 SPLAGQMPTAVTPGLS-PSSNQVPVSFLSDEMLPSETNKMNSVILSEAFT--TGIPVTPPSEKPK 1283

  Fly  1275 HLQRQLSMHSLLATDESSPVYEDFEQTPVKMVPSPIKSTISITYKSPEKEKKPSAILETNFDENT 1339
            .:.|...:|....:..|.|.|.:.:.||      |:::          .:.:.:..:.:||::..
 Frog  1284 EISRPPHLHQRSESFPSHPAYSNAKPTP------PVRT----------MDSRLATAMHSNFNDAI 1332

  Fly  1340 VYEQVKLFRNSVTEVNQMLHERSSLKQIAEEEQHDGGAY-KAAEMTQQLLQLEQEHHDHEEQQEK 1403
            .......|.|::     ||  .|||:.:.....:...:: |...:.:|.:...|.:..:.:|:  
 Frog  1333 TANNYHSFLNTM-----ML--PSSLEDVLPRHNYSHSSHLKTENIDEQGVNYRQPYLSNTKQE-- 1388

  Fly  1404 EPEDEEQSQLLYENIELRKPKTVYENLRGEEMKFITEEQKPNVDRIELDSLDSLPDNMEHEQSSP 1468
            :|.|...   ||....:...|:       |..:.....:.|.....|.:||....|...|.:|:.
 Frog  1389 DPADVGD---LYRQQYISTGKS-------ENAEIGNTYRHPYPSNTEPESLKEPLDPFLHHKSAV 1443

  Fly  1469 SKSPTFSVKELANKFESSPVEQLPNFDFSVRGGSMKKP---------NELSVPKTMPAPVPLKKL 1524
            :.. |:..:.|           ||:....|.|.....|         |:...|:|...|..:..:
 Frog  1444 APK-TYRAETL-----------LPHMPPQVYGSRCDTPSSTFYGTYINQAKHPRTRNRPDYMSSM 1496

  Fly  1525 NSSAQKITRSLDENAFVREFGGKQLQDLSLSNKLPEVMSEVNSRRKSFDFTRPKTLNPPKRLPGM 1589
            :...:..:........:|     ::|.|.:..:.|.                     ||.|...:
 Frog  1497 SPGLRSYSEDTSSYPTIR-----RVQSLHVPMQPPP---------------------PPIRTVPI 1535

  Fly  1590 SITE-------EICQKRVGE--------------MEAITPTTEN-RI------------------ 1614
            |.||       ..|.:.|.:              :..:.|..|| |:                  
 Frog  1536 SRTEVPPDDDPAYCPRPVYQYKQCPQFNSQSDYHVTQLQPYFENGRVHYRYSPYSGGPSYFSADS 1600

  Fly  1615 --------SLIQQNNMP--------------KEQQSSANQFLPPAGR-----KNVLTGVV----- 1647
                    |.::...:|              :.:.:..:|.|||..|     .|.::..|     
 Frog  1601 NFYDMDPYSTLRLRQLPLYPSRDFASYTTRLQPKNTYRSQGLPPYPRGTLREHNFISRDVPPALP 1665

  Fly  1648 ---------------LDRERIDKIKEERRQQLTQKYYGDTLKSRSRTELNSEDNFPAAESLRIKS 1697
                           :||.|:..::.|.|.:  |:..|..:...........::....:.:.::|
 Frog  1666 PEHPRPLHISWDMEDMDRYRLQSLRRENRAR--QRAKGPVMSQYDNVTPTLVEDVAGLDVIHLRS 1728

  Fly  1698 KS-RGDMHAL-----QKDIDMNLKQLSRVTG--GGSECTLHTGLSQGNG--------QEHLGQQR 1746
            :| .|....|     .||:        |..|  .|.|.|.:.....|||        |:..|..|
 Frog  1729 RSDPGKTPGLLSVAENKDV--------RYPGRAEGDEHTTYPPPVFGNGHQDKPSLPQKQSGSSR 1785

  Fly  1747 VR---RISDEKNQN---------------------CDTSNGGVSGITSTSLLSVKTTAQKYGSTS 1787
            ||   .||.|:...                     .|.|:.|:......:  |..::|.||..|.
 Frog  1786 VRMQHEISTEQRTQPSQDTLHRQPTEGRNGPPIPPVDYSSKGMPNPPDPA--SYHSSANKYNLTQ 1848

  Fly  1788 KTP----------ANKFERSQPMPRDRLQRNSLAESNA 1815
            :.|          ....|.|...|.|...|:...|..|
 Frog  1849 QEPMRLIHKELRLPEDIEHSHTRPADNQHRDCYREEPA 1886

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CdGAPrNP_001260600.1 PX_domain 168..274 CDD:295365 33/113 (29%)
SH3_ARHGAP32_33 299..358 CDD:212769 30/58 (52%)
RhoGAP_CdGAP 420..613 CDD:239849 114/195 (58%)
FliJ 1322..1457 CDD:304890 23/135 (17%)
arhgap32XP_004916221.2 PX_RICS 131..245 CDD:132831 39/139 (28%)
SH3_ARHGAP32_33 267..320 CDD:212769 30/58 (52%)
RhoGAP_CdGAP 414..608 CDD:239849 114/195 (58%)
ZipA <1758..>1898 CDD:225657 28/131 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 187 1.000 Domainoid score I3277
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003732
OrthoInspector 1 1.000 - - otm49161
Panther 1 1.100 - - O PTHR15729
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2589
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.010

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