DRSC/TRiP Functional Genomics Resources

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Protein Alignment CdGAPr and arhgap21b

DIOPT Version :9

Sequence 1:NP_001260600.1 Gene:CdGAPr / 35267 FlyBaseID:FBgn0032821 Length:1843 Species:Drosophila melanogaster
Sequence 2:XP_001918968.3 Gene:arhgap21b / 326745 ZFINID:ZDB-GENE-030131-4944 Length:1793 Species:Danio rerio


Alignment Length:1408 Identity:272/1408 - (19%)
Similarity:476/1408 - (33%) Gaps:490/1408 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 CHASTDKDAQAPPLQFEMDAPAAAISAQLNFKIVPADSLPGLSYQDMFASMNTSQISNASTESSC 100
            |.::.|:...:.|.   :|.||:. |...:...:||         .:..|...:.:|::.:.|:.
Zfish   684 CSSNLDESLDSIPF---IDEPASP-SVDHDGSHIPA---------SVVISGAQAALSDSPSPSTP 735

  Fly   101 SPPIQGAVPPPKPSRHMAVQPLNSKSCRFPKLEECAHFHYE-----------RVQLGPLSVQLLD 154
            ||.::..:...:.|...|:....:|:.|....:|....:.|           ||....|.....|
Zfish   736 SPLMRRQLSHDQESLRNAILESGTKTERSKSYDEGLDNYREEGRGRSSKPSLRVFRKALDGHKSD 800

  Fly   155 DKSEHMGSS--IASQSL-------------------GGDLP----HSSLRSFSPESCWFIIRVCP 194
            |.|....||  |.|.|.                   ||..|    ::.||..|            
Zfish   801 DSSSRRDSSTEIFSDSTKEGWLHFRQLNTEKGKRVGGGMRPWKQMYAVLRGHS------------ 853

  Fly   195 QRCEPFLIKRSFE-----NMQLLDE----MLHRCVYDRKISGLRNMEELAAELPSESDVEYAVAK 250
                .:|.|...|     |.||.|:    .:..|:.|...|..:....|..   :.||.||.   
Zfish   854 ----LYLYKDKKEGLAHVNSQLEDDPQSISIKACLIDISYSDTKRKNVLRL---TTSDCEYL--- 908

  Fly   251 YLERFSKIASDSLTCGTILTWLQLDNKGRRLPLADGETQRTINTPAVGAAYGVRRYQAQAPDEIN 315
                |.....:.:     |:|:::..:...|   |.|.....:|                 |.||
Zfish   909 ----FQAEGREDM-----LSWIRVIQENSNL---DEENAAVTST-----------------DLIN 944

  Fly   316 IEVGDMISVIDMPSPAESIWWRGKKSHLQKSLYEV----------GFFPQSCVATIGDKVPRNFP 370
            .::.:.||   |.:|:.......|.|....|:.:.          .:.|::......|       
Zfish   945 RKLKEYIS---MSAPSSKTEPSPKTSRQSLSIRQTLLGGSSKSQSPYSPKNEQDRSKD------- 999

  Fly   371 MPAPLVGHLDASPTK---------PVLRKHGKLIAFFRSFILSRPSRRRLKQSGIYRERVFNCDL 426
                     |:||.:         |.|:|              :|..:|......:..|:.||..
Zfish  1000 ---------DSSPPRDKAAWRRGIPGLKK--------------KPQDKRPAAGVTFGVRLDNCPP 1041

  Fly   427 SEHLLNSGQDIPMVLRSCAEFIENYGV-IDGIYRLSGITSNIQRLRRAFDEERVPDLGNPEMK-Q 489
            ::    :.:.:|:::..|.:.:|:.|: ..||||:.|..:.|..::...|.:.:.|:...:.| :
Zfish  1042 AQ----TNKFVPLIVEVCCKLVEDRGLEYTGIYRVPGNNAAISSMQEELDTKGMTDIDIQDDKWR 1102

  Fly   490 DIHAVSSLLKMYFRELPNPLCTYQLYDNFVEAIQVKADEADERLRLMKETVLKLPPPHYRTLKYL 554
            |::.:|||||.:||:||.||.|.:.|.||::|.::  ::..|||:.:|..:.:||..||.|||:|
Zfish  1103 DLNVISSLLKSFFRKLPEPLFTNEKYSNFIDANRM--EDPVERLKALKRLIHELPDHHYETLKFL 1165

  Fly   555 AEHLYKVSQHHGRTGMTDKNLAIVWAPNLLRSPALESGGVAALRGVGVQAVVTEYLIRNCHNIFD 619
            :.||..||::..:..|..:|||||:.|.|:|:..                          .|:..
Zfish  1166 SGHLKTVSENCEKNKMEPRNLAIVFGPTLVRTSE--------------------------DNMTH 1204

  Fly   620 ALDDHPARHSMVASATAAAANAAGGELRLESLTDCESLLVEQREQDQSLGVVERPKSLSTGGAKL 684
            .:...|.::.:|.:                        |::|.:.                   .
Zfish  1205 MVTHMPDQYKIVET------------------------LIQQYDW-------------------F 1226

  Fly   685 ISLEEAQERHSRVEGADLKQSLPISMLTSASSNAASNIGSYIEVGGGPSSLPDKYHTVLSAPRSW 749
            .:.:..:|..:.||.....||.|:..:    .:..:|||                          
Zfish  1227 FTEDGDEEPTTTVEQESTVQSQPVPNI----DHLLTNIG-------------------------- 1261

  Fly   750 QKRKPDKTPSWKSIFSRSQRQGNPDPGQKITTDVKDSVASRVSFVQASHAHASKELTKHDKPKSI 814
                                :..|.||     ||.||..|     .::.:......|..|:..| 
Zfish  1262 --------------------RTAPSPG-----DVSDSTTS-----DSAKSKQGSWGTGKDQYSS- 1295

  Fly   815 ELLETT--SNERDPKPMDLCIRSNSIDSLRTVGHSRSVSHDSYFDLLQSPQRGHMTTCPSREL-- 875
            |||.|:  ::.:..||.|....|:|.|.|           |:.|.....|.:.. ...|:.:.  
Zfish  1296 ELLRTSIFASRKRKKPKDKPQPSSSDDDL-----------DASFSKKDLPVQND-PNWPADDQTE 1348

  Fly   876 ---SELGLNFDREEPE-------MRIFSESESLVSSPRVGKENVPPASGSATRRIMRARPEDFSS 930
               ||:||:..|.|.:       :.:.||::.|::      |::|..                :.
Zfish  1349 DAESEVGLDDQRTEDDDQSPGDGLDLTSENKQLIT------EHLPQQ----------------TC 1391

  Fly   931 QTNSVNPSPKKQPRLNLLSPSSARTMPPPPLSAPGTASSSCGHESGGAENCCKRYKLEDQLCDIQ 995
            .::.:|.|||         ||...|          ..||...|.|...:.|..            
Zfish  1392 PSSKINTSPK---------PSYHMT----------RQSSLSDHPSNYDDGCVS------------ 1425

  Fly   996 FIDCGTPENVPTTQQQFASVEVHPPPKPARANQSPISSSN---GASVGS-----SSSSTRYSYPS 1052
              |.||   :.:|..| |||   |..:..|.....:.|:.   ||.|.|     |::|:...:..
Zfish  1426 --DLGT---LNSTSSQ-ASV---PRIRHGRTTGHWMESAGMGLGAEVCSITSDYSTTSSMTFHTG 1481

  Fly  1053 VQLGAKRKEQQDAKERFSYQGTFTQPGQKQESSAPRPVHSTNNGATLRKPRV----EPVED---- 1109
            |:..|...|.|...|.   :|......:.:..|..||: .|::.:.|....|    .|.||    
Zfish  1482 VESIALSPEVQSVAES---RGDDADDERSELISEGRPM-ETDSESDLSVFAVGRDGVPAEDSSQL 1542

  Fly  1110 -GQIKLHVPTPTTPARSPRYSLLLCDT--------ESSDNSSAVNTPQYDMEPLMLTSAMSGVSG 1165
             |.:   .|....|:..|.:.::.|||        :.:|:.|:.:..:.|.|...::..:..|.|
Zfish  1543 GGSV---TPLQDVPSLIPSHRIIACDTLARKRGSRQKTDSESSADGSRSDKESTRISRVLEAVKG 1604

  Fly  1166 -------VSSNVQQQQL----------------------LLGVDASSSYLGSSHESLGQNINNHH 1201
                   .||..:.::.                      :.||.:..:....:......||...|
Zfish  1605 RSTGSLSSSSRSESERAEPMWRIKITDRLKCRLRTSADDMFGVGSQRTRSPETRSKRKSNIRRRH 1669

  Fly  1202 D-AEQRDMNALK----------RELSLDLNPLQPRLP---------------QPANRAATLPVKD 1240
            . ..|||...|.          .|||. ::.|:|:..               :.:|...:|.|.|
Zfish  1670 TMGGQRDFAELSVIGDWQRVEGNELSA-MDRLKPKCSSQDFSIRDWIARERHRTSNPEVSLDVLD 1733

  Fly  1241 QLQAAAAAMCSS-PNNSNFTDNTSQSVTPSEYGYQHLQRQLSM 1282
            ...:.:..:.|: |::|              |..|||...:::
Zfish  1734 LHSSRSRDLLSAGPSHS--------------YLGQHLNGDVAV 1762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CdGAPrNP_001260600.1 PX_domain 168..274 CDD:295365 25/137 (18%)
SH3_ARHGAP32_33 299..358 CDD:212769 11/68 (16%)
RhoGAP_CdGAP 420..613 CDD:239849 58/194 (30%)
FliJ 1322..1457 CDD:304890
arhgap21bXP_001918968.3 PDZ_signaling 50..156 CDD:238492
PH_ARHGAP21-like 817..931 CDD:269955 25/147 (17%)
PH 817..926 CDD:278594 24/139 (17%)
RhoGAP_ARHGAP21 1031..1227 CDD:239860 63/270 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2255
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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