DRSC/TRiP Functional Genomics Resources

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Protein Alignment CdGAPr and Arhgap22

DIOPT Version :9

Sequence 1:NP_001260600.1 Gene:CdGAPr / 35267 FlyBaseID:FBgn0032821 Length:1843 Species:Drosophila melanogaster
Sequence 2:XP_006519017.1 Gene:Arhgap22 / 239027 MGIID:2443418 Length:738 Species:Mus musculus


Alignment Length:758 Identity:172/758 - (22%)
Similarity:280/758 - (36%) Gaps:177/758 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 RRLPLADGETQRTINTPAVGAAYGVRRYQAQAPDEINIEVGDMISVIDMPSPAESIWWRGKKSHL 343
            |...|..||..|:...|.|....|                           |.....|..|:..:
Mouse    39 RSKSLVMGEQSRSPGRPLVPHKLG---------------------------PVLKAGWLRKQRSI 76

  Fly   344 QKSLYEVGFF----------------PQSCVATIGDKVPRNFPMPAPLVGHL-DASPTKPVLRKH 391
            .|:..:..|.                ||..::..|.:|....|.|.....|| :.:|.....|: 
Mouse    77 MKNWQQRWFVLRGDQLFYYKDKDESKPQGFISLQGTQVTELLPDPEDPGKHLFEITPGGATERE- 140

  Fly   392 GKLIAFFRSFILSRPSRRRLK------------------------------QSGIYRERVFNCDL 426
             |:.|...:.:|...|:|.::                              .:||:.:|:.  |.
Mouse   141 -KVPANPEALLLMASSQRDMEDWVQAIRRVIWAPLGRGTSRSSHVHPVKPLSAGIFGQRLE--DT 202

  Fly   427 SEHLLNSGQDI-PMVLRSCAEFIENYGVI-DGIYRLSGITSNIQRLRRAFDEERVPDLGNPEMKQ 489
            ..|....|..: |:::..|.:||...|:. :|::|:.|..:.::.|:.:||....|..   :...
Mouse   203 VHHERKFGPRLAPLLVEQCVDFIRERGLSEEGLFRMPGQANLVRDLQDSFDCGEKPLF---DSTT 264

  Fly   490 DIHAVSSLLKMYFRELPNPLCTYQLYDNFVEAIQ-VKADEADERLRLMKETVLKLPPPHYRTLKY 553
            |:|.|:||||:|.||||.|:..:..|::|:...| :..||.:..:.|.|: |..||..:|..|:|
Mouse   265 DVHTVASLLKLYLRELPEPVIPFARYEDFLSCAQLLTKDEGEGTVELAKQ-VSNLPQANYNLLRY 328

  Fly   554 LAEHLYKVSQHHGRTGMTDKNLAIVWAPNLLRSPALESGGVAALRGVGVQAVVTEYLIRNCHNIF 618
            :.:.|.:|..|.....|:.:|||.|:.||:|| |.:|. .|..:.|..:...:...|||....:|
Mouse   329 ICKFLDEVQAHSDVNKMSVQNLATVFGPNILR-PQIED-PVTIMEGTSLVQHLMTVLIRKHGQLF 391

  Fly   619 DA--LDDHPARHSMVASATAAAANAAGGE--------LRLESLTDCESLLVEQREQDQSLGVVER 673
            .|  |::..:.|..|...:........||        .|..|| |..:..|..|.....||....
Mouse   392 AATSLEEPASPHGTVEWGSEEVTRDHRGEPGSPGLPTHRTSSL-DGPAAAVLSRTSPPRLGSQTG 455

  Fly   674 PKSLSTGGAKLISL----EEAQERHSRVEG-ADLKQSLPISMLTSASS---NAASNIGSYIEVGG 730
            |.:.|. |.|:.:|    ...:::.||.|. ..:..||.:.:::|..:   |..|::.|:.....
Mouse   456 PAATSP-GKKMHTLPVWKSSFRQQGSRSESPKGVNSSLEVPIISSGGNWLINGLSSLRSHRRASS 519

  Fly   731 GPSSLPDKYHTVLSAPR--SWQKRKPDK---------TPSWKSIFSRSQRQGNPDPGQKITTDVK 784
            |     |:.....||.|  ::....|..         :.|| |:.|.|:.           ..|.
Mouse   520 G-----DRLKDTGSAQRLSTYDNVPPSSQFSSTASVASTSW-SVASSSRE-----------ASVS 567

  Fly   785 DSVASRVSFVQA-SHAHASKELTKHDKPKSIELLETTSNERDPKPMDLCIRSNSIDSLRTVGHSR 848
            ...|.|.|...| |..|....|.....|.|.|      ..:.|   ||   .:|:|. ..||...
Mouse   568 SCTACRASNSSACSSLHTEWALEPSPLPSSSE------GHQSP---DL---GHSLDE-PCVGSGS 619

  Fly   849 SVSHDSYFDLLQSPQRGHMTTCPS--RELSELGLNFDREEPEMRIFSESESLVSSPRVGKENVPP 911
            |..:|.     .||.:.|:..|.:  .:::||.....::..|.:     .||.|.          
Mouse   620 SEPNDP-----GSPTQAHVRRCRALQGQVAELRAELCQQRTEYK-----RSLKSI---------- 664

  Fly   912 ASGSATRRIMRARPEDFSSQTNSVNPSPKKQPRLNLLSPSSAR 954
            ..|||..|...:|.|:      .::...||...|.:...:|.|
Mouse   665 EEGSADLRKQMSRLEE------ELDQERKKYAMLEIKLRNSER 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CdGAPrNP_001260600.1 PX_domain 168..274 CDD:295365
SH3_ARHGAP32_33 299..358 CDD:212769 8/74 (11%)
RhoGAP_CdGAP 420..613 CDD:239849 60/195 (31%)
FliJ 1322..1457 CDD:304890
Arhgap22XP_006519017.1 PH-like 62..177 CDD:388408 21/143 (15%)
RhoGAP_ARHGAP22_24_25 193..391 CDD:239855 63/205 (31%)
Macoilin <529..>719 CDD:370635 49/224 (22%)
HCR <638..719 CDD:284517 17/85 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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