DRSC/TRiP Functional Genomics Resources

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Protein Alignment CdGAPr and Arhgap25

DIOPT Version :9

Sequence 1:NP_001260600.1 Gene:CdGAPr / 35267 FlyBaseID:FBgn0032821 Length:1843 Species:Drosophila melanogaster
Sequence 2:NP_001032816.1 Gene:Arhgap25 / 232201 MGIID:2443687 Length:648 Species:Mus musculus


Alignment Length:674 Identity:154/674 - (22%)
Similarity:252/674 - (37%) Gaps:196/674 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 PSPAE---SIWWRGKKSHLQKS------------LY----EVGFFPQSCVATIGDKVPRNFPMPA 373
            |:|.|   .:.|..|:..:.|:            ||    |....||.|:.           :|.
Mouse    41 PNPLERPIKVGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDSKPQGCMY-----------LPG 94

  Fly   374 PLVGHLDASPTKPVLRKHGKLIAFFR--------------SFILSRPSRRRLKQ--------SGI 416
            ..|..:..:|     .:.||.:  |.              |::|...|:..:::        :|.
Mouse    95 STVKEIATNP-----EEAGKFV--FEVIPASSDQNRIGQDSYVLMASSQVEMEEWVKFLRRVAGT 152

  Fly   417 YRERVFNCDLSE----------HLLNSGQDIPMVLRSCAEFIENYGVI-DGIYRLSGITSNIQRL 470
            ....||...|.|          ||      :|:::..|||||..:||. :||:||.|..:.:::|
Mouse   153 PSGAVFGQRLDETVAYEQKFGPHL------VPILVEKCAEFILEHGVSEEGIFRLPGQDNLVKQL 211

  Fly   471 RRAFDEERVPDLGNPEMKQDIHAVSSLLKMYFRELPNPLCTYQLYDNFVEAIQ-VKADEADERLR 534
            |.|||....|..   :...|:|.|:||||:|.|:||.|:..:..|:.|:...| :.||||..:..
Mouse   212 RDAFDAGERPSF---DRDTDVHTVASLLKLYLRDLPEPVVPWSQYEGFLLCGQLMNADEAKAQQE 273

  Fly   535 LMKETVLKLPPPHYRTLKYLAEHLYKVSQHHGRTGMTDKNLAIVWAPNLLRS----PALESGGVA 595
            |:|: :..||..:|..|.|:...|:::..:.....|:..|||.|...||:||    ||:      
Mouse   274 LVKQ-LSTLPRDNYNLLSYICRFLHEIQLNCAVNKMSVDNLATVIGVNLIRSKVEDPAV------ 331

  Fly   596 ALRGV-GVQAVVTEYLIRNCHNIF-----------------------------DALDDHPARHSM 630
            .:||. .:|.|:| .:||:...:|                             ||.:|.|...:.
Mouse   332 IMRGTPQIQRVMT-MMIRDHEVLFPKSKDAPISPPAQKNDAKKAPVPRSSVGWDATEDPPLSRTD 395

  Fly   631 VASATAAAANAAGGELRLESLTDCESLLVEQREQDQSLGVVERP-----------KSL------- 677
            ..|.||::.:|......|.|         :|.::|......|.|           ::|       
Mouse   396 SFSNTASSPDATSPTGPLPS---------DQHQEDSGKAPRENPGDWKMQSRKRTQTLPNRKCFL 451

  Fly   678 -----STGGAKL----------ISLEEAQERHSRVEGADLKQSLPISMLTSASSNAASNIGSYIE 727
                 .|..:||          .|..:|.|.|.|....||:. |.....||...|..::..|.  
Mouse   452 TSAFQGTTSSKLEIFKNEFWSPSSEAKAGEGHRRTMSQDLRH-LSNDQRTSTYDNVPTSPQSQ-- 513

  Fly   728 VGGGPSSLPDKYHTVLSAPRSWQKRKP-DKTPSWKSIFSRSQRQGNPDPGQKITTDVKDSVASRV 791
              |.|:.       .||.|.|..||.. ..|.|.....|::..:.:.|..|:....::..:.::.
Mouse   514 --GNPAG-------ALSPPASDSKRDALVSTDSEMEAGSKNSGEDDLDSLQRTVQSLQKEIETQK 569

  Fly   792 SFVQASHAHASKELTKHDK-PKSIELLETTSNERDPKPMDLCIRSNSID-SLRTVGHSRS----- 849
            ...:....:..||  .:|. .|.:.|.|....||.        :..::: |||.|..||.     
Mouse   570 QVYEEQIKNLEKE--NYDVWAKVVRLNEELERERK--------KFAALEISLRNVERSREDVEKR 624

  Fly   850 --VSHDSYFDLLQSPQRGHMTTCP 871
              |..:...:.::|.::....|.|
Mouse   625 NRVLEEEVKEFVKSMEKPKTKTDP 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CdGAPrNP_001260600.1 PX_domain 168..274 CDD:295365
SH3_ARHGAP32_33 299..358 CDD:212769 11/48 (23%)
RhoGAP_CdGAP 420..613 CDD:239849 69/209 (33%)
FliJ 1322..1457 CDD:304890
Arhgap25NP_001032816.1 PH_RhoGap25-like 45..157 CDD:270083 20/129 (16%)
PH 47..149 CDD:278594 18/119 (15%)
RhoGAP_ARHGAP22_24_25 156..354 CDD:239855 70/214 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 356..559 43/223 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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