DRSC/TRiP Functional Genomics Resources

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Protein Alignment CdGAPr and arhgap31

DIOPT Version :9

Sequence 1:NP_001260600.1 Gene:CdGAPr / 35267 FlyBaseID:FBgn0032821 Length:1843 Species:Drosophila melanogaster
Sequence 2:XP_005165688.1 Gene:arhgap31 / 101885883 ZFINID:ZDB-GENE-100922-256 Length:1391 Species:Danio rerio


Alignment Length:1607 Identity:390/1607 - (24%)
Similarity:592/1607 - (36%) Gaps:457/1607 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   404 SRPSRRRLKQSGIYRERVFNCDLSEHLLNSGQDIPMVLRSCAEFIENYGVIDGIYRLSGITSNIQ 468
            ::.::.:.|:.|  .:..|.|||||||.:||||:|.||::||||||.:|::||||||||||||||
Zfish     3 NKAAKLKSKRKG--TDNAFGCDLSEHLQSSGQDVPHVLKTCAEFIEKHGIVDGIYRLSGITSNIQ 65

  Fly   469 RLRRAFDEERVPDLGNPEMKQDIHAVSSLLKMYFRELPNPLCTYQLYDNFVEAIQVKADEADERL 533
            :||:.|..|..|||......||||.|.||.|:|||||||||.||:||..|..|:.||  |..|:|
Zfish    66 KLRQEFSSELCPDLTKEVYLQDIHCVGSLCKLYFRELPNPLLTYELYSKFTHAVSVK--EEQEQL 128

  Fly   534 RLMKETVLKLPPPHYRTLKYLAEHLYKVSQHHGRTGMTDKNLAIVWAPNLLRSPALE----SGGV 594
            |.::..:.:||..|:|||:||.:||..::....:|.|..:|||:|||||||||..:|    :|.:
Zfish   129 RNIRSAIKELPESHFRTLEYLTKHLAYLATLSHQTNMHARNLALVWAPNLLRSKEVEVPSCNGDI 193

  Fly   595 AALRGVGVQAVVTEYLIRNCHNIFDALDDHPARHSMVASATAAAANAAGGELRLESLTDCESLLV 659
            |.|. |.||..|.|:::.:...||: |:..|::      |....:.|.|                
Zfish   194 AFLE-VRVQQSVVEFILNHTEQIFN-LEFQPSK------ARDGPSMACG---------------- 234

  Fly   660 EQREQDQSLGVVERPKSLSTGGAKLISLEEAQER-----HSRVEGADLKQSLPISMLTSASSNAA 719
               |:..:|     |.|...|..||:||||||.|     |..::....:.|||      .:|.||
Zfish   235 ---EKYATL-----PASTQCGPMKLMSLEEAQARSLSPNHPVMKERQRENSLP------DTSTAA 285

  Fly   720 SNIGSYIEVGGGPSSLPDKYHTVLSAPRSWQKRKPDKTPSWKSIFS----------RSQRQGN-- 772
                              .||||:....| :::...|:..||||||          :..|.|:  
Zfish   286 ------------------MYHTVIDLSDS-RRKFSGKSKKWKSIFSLGRSVIDSKGKLSRNGSVF 331

  Fly   773 ---PDPGQKITTDVKDSVASRVSFVQASHAHASKE------LTKHDKPKSIELLETTSNERDPKP 828
               .:..:|.......|:.|..||.......|:.|      :..| |.:::.......|::||| 
Zfish   332 MRAQNSSEKTAIRPSKSMDSLCSFQAPDEDKAAAEGANGMFIPIH-KSRTLGSDINYLNKKDPK- 394

  Fly   829 MDLCIRSNSIDSL--RTVGHSRSVSHDSYFDLLQSPQRGHMTTCPSRELSELGLNFDREEPE-MR 890
            .||..::.|..||  :..|.|.:.|..|               .||..||.|    .:..|| ::
Zfish   395 WDLESQTASGGSLNEKREGASNASSSSS---------------SPSSSLSPL----QKSLPEQLK 440

  Fly   891 IFSESESLVSSPRVGKENVPPASGSATRRIMRARPEDFSSQTNSVNPSPKKQPR-LNLLSP---- 950
            :|...|.....|...|......||||...  .:|| .|......:..||:.|.: ||:..|    
Zfish   441 VFKGDERGGCQPTSPKNRRMLYSGSANNG--SSRP-SFPGSLFPLESSPRHQRKALNISEPFAVS 502

  Fly   951 -----SSARTMPPPPLSAPG---------------TASSSCGH--ESGGAENCC--KRYKLEDQL 991
                 |:.......|..|||               .|....||  ||.||...|  ..:...|..
Zfish   503 VPLRVSAVINSNSTPCRAPGKERDRGLGGLFRPSKEAGPLEGHRRESMGAAGLCGAGNFSFTDWE 567

  Fly   992 CDI--QFIDCGTPENVPTTQQQFASVEVHPPPKPARANQSPISSSNGASVGSSSSSTRYSYP--- 1051
            ..:  :.|..|..||                          .|..:|.|:.|:||    |:|   
Zfish   568 TGLAGRAIGSGHREN--------------------------SSGGSGCSIYSNSS----SFPMEN 602

  Fly  1052 -----------SVQLGAKRKEQQDAKERFSYQGTFTQPGQKQESSA-PRPVHSTNNGATLRK-PR 1103
                       ::.:...:.:..:.:|..:....| ||....|:.| ...:.:|:....:.| .:
Zfish   603 EEQSGEGDFTDAIAMATTKSKDAEVRELIATVENF-QPQASSETKAIGEELETTSTKQEMAKLDK 666

  Fly  1104 VEPVEDGQIKLHVPTPTTPARSPRYSLLLCDTESSDNSSAVNTPQYDMEPLMLTSAMSGVSGVSS 1168
            :|.::      .||           |..:.|..|.......|.|...::|.        ::.::.
Zfish   667 LELID------KVP-----------SSGMHDKVSITEVKTTNMPNDGVKPC--------ITKING 706

  Fly  1169 NVQQQQLLLGVDASSSYLGSSHES-------LGQNINNHHDAEQRDMNALK----RELSLD---- 1218
            |  |..|.|...|..|.|.|:..|       |.:|:...|.......:.:|    |.||.|    
Zfish   707 N--QGNLKLSAQARRSSLPSNTVSSKGLFIDLTKNVMFDHPGATTFNSVMKHMPERLLSCDGDWN 769

  Fly  1219 -LNPLQPRLPQPANRAAT----------LPVKDQLQAAAAAMCSSP----------NNSNFTDNT 1262
             |:....|....|....|          |...|.||.|...:...|          :.|:..|||
Zfish   770 YLDSDSDRTEHKARNIITTSLQLSPFLHLKETDILQDAEPCIEEEPKIDLCEKDGTSKSDSKDNT 834

  Fly  1263 SQSVTPSEYGYQHLQRQLSMHSLLATDESSPVYEDFEQTPVKMVPSPIKSTISITYKSPEKEKKP 1327
            |.||            :|.:|    |||.|....|.                      .|||.|.
Zfish   835 SVSV------------KLDLH----TDEESLRTSDI----------------------CEKENKK 861

  Fly  1328 SAILETNFDENTVYEQVKLFRNSVTEVNQMLHERSSLKQIAEEEQHDGGAYKAAEMTQQLLQLEQ 1392
            .:      ||....:.....:.::..::..|:|:....:|.::....|......|..:.|...:|
Zfish   862 VS------DEPRKLDLAGRIKGNLERLSTCLNEKHLTLEIQDDVDACGSNLDQVEPWEDLCSAQQ 920

  Fly  1393 EHHDHEEQQEKEPEDEEQSQLLYENIELRKPKTVYENLRGEEMKFITEE-----QKPNVDRIELD 1452
                                  :....|..||  .|:|      |.|:.     ||.:...::..
Zfish   921 ----------------------WVTSPLHSPK--LEDL------FPTQREILPCQKVHCQVLDKP 955

  Fly  1453 SLDSLPDNMEHEQSSPSKSPTFSVKELA-NKFESSPVEQLPNFDFSVRGGSMKKPNELSVPKTMP 1516
            :.|.||::...|...|:     ::.|:| .:.|::...:|.|.||                    
Zfish   956 NADELPNSRNPEAKEPA-----ALDEIAPTQTEAAVTAELGNSDF-------------------- 995

  Fly  1517 APVPLKKLNSSAQ-----KITRSLDENAFVREFGGKQLQDLSLSNKLPEVMSEVNSRRKSFDFTR 1576
               |..|.|:...     :||...|.:.|  :|.|.: .|:.|  ::|:|             .:
Zfish   996 ---PTGKKNADTDVACFAQITAHFDRDKF--KFEGAK-DDIKL--EIPQV-------------KQ 1039

  Fly  1577 PKTLNPPKRLPGMSITEEICQKRVGEMEAITPTTENRISLIQQNNMPKEQQSSANQFLPPAGRKN 1641
            .||.|.|:...||....:..|||.......|......:...|.:..||.:..|.|..|...|.::
Zfish  1040 LKTFNDPEETTGMQNMSKAKQKRSQRFHRQTSHEFCIMEKSQGSGKPKLRPCSLNLDLGHQGFRD 1104

  Fly  1642 VLTGVVLDRERIDKIKEERRQQLTQKYYGDTLKSRSRTELNSEDNFPAAESLR------IKSKSR 1700
            :.....|         :..:|.:|.    :.....|..||....:.|.|...|      :.|...
Zfish  1105 ISNSQYL---------KSGKQWMTP----EAKDGSSSLELELFLSGPKAPMRRNSAPVSVSSVRT 1156

  Fly  1701 GDM----------------------HAL--QKDIDMNLKQLSRVTGGGSECTLHTGLSQGNGQEH 1741
            ..|                      |.|  :|:.:.:..|:::.|.....    |....|.....
Zfish  1157 AFMIKTCQAKAVPVIPPKIQYSHIPHTLPERKNAEKSTDQVNKSTPEKKP----TKSKLGKASSL 1217

  Fly  1742 LGQQRVRRISDEKNQNCDTSNGGVSGITSTSLLSVKTTAQKYGSTS--KTPANKFERSQP----M 1800
            ...|:|.|   |..|:.:..    |||.....::..|..:.|..||  ..|..:.:||..    |
Zfish  1218 FPLQKVCR---EDRQSTEPP----SGIQRHKSMNSATCNENYKPTSIPDLPVLRRKRSANGDTFM 1275

  Fly  1801 PRDRLQRNSLAESNAGTNNREK------ISPQFSIRDVTAMFESRSQ 1841
            .|.|.:|:||.: .:...||.:      .||.|.|.|..::.:...|
Zfish  1276 DRPRPERSSLLQ-RSSFRNRPRPQSLILFSPPFPIMDYPSVGDDNKQ 1321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CdGAPrNP_001260600.1 PX_domain 168..274 CDD:295365
SH3_ARHGAP32_33 299..358 CDD:212769
RhoGAP_CdGAP 420..613 CDD:239849 105/196 (54%)
FliJ 1322..1457 CDD:304890 23/139 (17%)
arhgap31XP_005165688.1 RhoGAP_CdGAP 18..211 CDD:239849 105/195 (54%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579740
Domainoid 1 1.000 185 1.000 Domainoid score I3308
eggNOG 1 0.900 - - E1_KOG1449
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15729
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2255
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.830

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