DRSC/TRiP Functional Genomics Resources

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Protein Alignment CdGAPr and bcr

DIOPT Version :9

Sequence 1:NP_001260600.1 Gene:CdGAPr / 35267 FlyBaseID:FBgn0032821 Length:1843 Species:Drosophila melanogaster
Sequence 2:NP_001123792.1 Gene:bcr / 100170543 XenbaseID:XB-GENE-980812 Length:1162 Species:Xenopus tropicalis


Alignment Length:498 Identity:122/498 - (24%)
Similarity:198/498 - (39%) Gaps:113/498 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 RVQLGPLSVQLLDDKSEHMGSS-----------------IASQSLGGDLPHSSLRSFS------- 182
            :|::..|...:..:|..|.|..                 :.|.|:...:.:.:.:|::       
 Frog   678 KVKISQLKSDIQREKKAHKGGKGLERLRKKLSEQESVLLLVSPSMAFRIQNRNGKSYTLLTWSDY 742

  Fly   183 PESCWF-IIRVCPQRCEPFLIKRSFENMQLLDEML-HRCVYDRKISGLRNMEELAAELPSESDVE 245
            ..:.|. .||...::|     .:||....|..:|| :.||      .|:.:..:...|..|.|..
 Frog   743 ERAEWAEHIREQQKKC-----FKSFSLSSLEIQMLTNSCV------KLQTVHRVPLTLSKEDDES 796

  Fly   246 YAVAKYLERFSKIASDSLTCGTILTWLQLDNKGRRLPLADGETQRTINTPAVGAAYGVRRYQAQA 310
            ..:..:|......|:.......:...|::|:.|..:..|.....|....|.....:         
 Frog   797 SGLYGFLNVIVHSATGFQQSSNLFCTLEVDSFGYFVNKAKTRVYRNTTEPNWNEEF--------- 852

  Fly   311 PDEINIEVGDMISVIDMPSPAESIWWRGKKSHLQKSLYEVGFFPQSCVATIGDKVPRNFPMPAPL 375
              ||.:|....:.::...          |..:..:.:.|.|          ||...|   |.|..
 Frog   853 --EIELEGSQTLRILCYE----------KSCNRNRPMKEDG----------GDSSER---MVAKG 892

  Fly   376 VGHLDASPT------KPVLRKHG---KLIAFF--RSFILSR-PSRRRLKQSGIY---------RE 419
            ...|::...      :.|:..:|   ||...|  |.|.|.| |||   ||:|::         ||
 Frog   893 QVQLESQLALGKDWHRSVVSMNGIEVKLSMKFTSREFSLKRLPSR---KQTGVFGVKIAVVTKRE 954

  Fly   420 RVFNCDLSEHLLNSGQDIPMVLRSCAEFIENYGVID-GIYRLSGITSNIQRLRRAFDEERVPDLG 483
            |              ..:|.::|.|.|.||..|:.: ||||:||:.::||.|:.|||... .|:.
 Frog   955 R--------------SKVPYIVRQCVEEIERRGLEEVGIYRVSGVATDIQALKNAFDANN-KDVS 1004

  Fly   484 NPEMKQDIHAVSSLLKMYFRELPNPLCTYQLYDNFVEAIQVKADEADERLRLMKETVLKLPPPHY 548
            ......|::|::..||:||||||.||.|.:||.||.|.|.:....|.|  ..|...:|.||.|:.
 Frog  1005 VMMSDMDVNAIAGTLKLYFRELPAPLFTDELYPNFAEGIALSDPVAKE--SCMLNLLLSLPEPNL 1067

  Fly   549 RTLKYLAEHLYKVSQHHGRTGMTDKNLAIVWAPNLLRSPALES 591
            .|..:|.:||.:|:::..:..|:..|||.|:.|.|||....:|
 Frog  1068 LTFLFLLDHLKRVAENESQNKMSLHNLATVFGPTLLRPSEKDS 1110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CdGAPrNP_001260600.1 PX_domain 168..274 CDD:295365 20/114 (18%)
SH3_ARHGAP32_33 299..358 CDD:212769 6/58 (10%)
RhoGAP_CdGAP 420..613 CDD:239849 62/173 (36%)
FliJ 1322..1457 CDD:304890
bcrNP_001123792.1 Bcr-Abl_Oligo 3..73 CDD:312543
SF-CC1 27..>149 CDD:273721
RhoGEF 392..579 CDD:366202
PH_BCR_vertebrate 574..767 CDD:270173 14/93 (15%)
C2_ABR 803..924 CDD:176068 24/154 (16%)
RhoGAP_Bcr 943..1143 CDD:239852 64/185 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2255
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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