DRSC/TRiP Functional Genomics Resources

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Protein Alignment CdGAPr and si:dkeyp-68b7.12

DIOPT Version :9

Sequence 1:NP_001260600.1 Gene:CdGAPr / 35267 FlyBaseID:FBgn0032821 Length:1843 Species:Drosophila melanogaster
Sequence 2:XP_021324056.1 Gene:si:dkeyp-68b7.12 / 100151151 ZFINID:ZDB-GENE-141212-333 Length:1429 Species:Danio rerio


Alignment Length:1631 Identity:381/1631 - (23%)
Similarity:589/1631 - (36%) Gaps:478/1631 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   408 RRRLKQSGIYRERVFNCDLSEHLLNSGQDIPMVLRSCAEFIENYGVIDGIYRLSGITSNIQRLRR 472
            |.|.|..|  |::||.|||.|||.:|.||:|.|||||:||||.:|::||||||||::||.|:||.
Zfish     3 RGRRKPGG--RDKVFGCDLLEHLSSSAQDVPQVLRSCSEFIEKHGIVDGIYRLSGVSSNTQKLRS 65

  Fly   473 AFDEERVPDLGNPEMKQDIHAVSSLLKMYFRELPNPLCTYQLYDNFVEAIQVKADEADERLRLMK 537
            .||.|..|||......||||.||||.|.|||||||||.||:|||.|.:|:.|:.:  ||||..::
Zfish    66 EFDSEGSPDLYKEVYLQDIHCVSSLCKAYFRELPNPLLTYELYDRFADAVAVQLE--DERLVKIR 128

  Fly   538 ETVLKLPPPHYRTLKYLAEHLYKVSQHHGRTGMTDKNLAIVWAPNLLRSPALES---GGVAALRG 599
            |.:..||.||||||::|..||.|:|.....|.|..:|||||||||||||..:||   .|.||...
Zfish   129 EVLKDLPAPHYRTLEFLMRHLVKMSTFASETNMHSRNLAIVWAPNLLRSKDIESTGFNGTAAFME 193

  Fly   600 VGVQAVVTEYLIRNCHNIF-------------------DALDDH--------------------P 625
            |.||::|.|:::.:...:|                   .:.|||                    |
Zfish   194 VRVQSIVVEFVLTHVPELFPETGVSMERRKSLPSPSILSSQDDHFFKSLPLISSGNLSPGDGPLP 258

  Fly   626 AR--HSMVASATAAAANAAGGELRLESLTDCESLLVEQREQDQ---------SLGVVERPKSLST 679
            .|  |:::........:..|  .:.:|:.:..:.|.:.|::::         ||...:...||||
Zfish   259 MRPYHAIIDGTDKRKGSLKG--RKWKSIFNLGARLHDPRKKNKYCPKDKEKTSLRPAKSMDSLST 321

  Fly   680 GGAKLISLEEAQERHSRVEGADLKQSLPISMLTSASSN----AASNIGSYIEVGGGPSS------ 734
            |   ..:||:::...:         :||..:|:|||.:    |:|.:| ....|||.||      
Zfish   322 G---TTALEDSKPPQA---------ALPPLVLSSASGSSEGVASSGVG-VASTGGGVSSGYAVTY 373

  Fly   735 --------------LPDKYHTVLSA-----PRSWQKRKPDKTPSWKSIFSRSQRQ---------- 770
                          :|..|..:.||     |.....:.|       :|.|:::|:          
Zfish   374 RRTGGAQVSVVSAGIPGSYTRLDSAGGAEGPAQGVAKSP-------AISSKAERRAGMHITGPFS 431

  Fly   771 ------------------GNPDPGQKITTDVKDSVA-SRVSFVQASHAHASKELTKHDKPKS-IE 815
                              |..|..|....|||.:.. |:......:.|::|.| |:.|..|. ||
Zfish   432 VTVPLHITSGLALGVLHGGWNDKEQTQDEDVKSTDGDSQSKNCDQNEANSSVE-TQVDCGKDVIE 495

  Fly   816 LLETTSNERDPKPMDLCIRSNSI-DSLRTVGHSRSVSHDSYFDLLQSPQRGHMTTCPSRELSELG 879
            ..|.:::....:..||.....|: |::..|......:.:.|.|:     |.|:...|   :|.:.
Zfish   496 TEEKSTDGNKAETEDLNSTQESVKDNVEDVKGKEETTEEEYMDM-----RAHVQQTP---VSPIY 552

  Fly   880 LNFDREEPEMR-----IFSESESLVSSPRVGKEN-----------------VPPASGSATRRIMR 922
            ..|..:|.:::     :.|...|:.:.|....|.                 :.||...:..   .
Zfish   553 CEFQEQELDLQEAFGFLDSMDNSVSNQPEFSVEAPCFEGEYEEDEDEDQAVLSPAQNCSEN---C 614

  Fly   923 ARPEDFSSQTNSVNPSP--------KKQPRLNLLSPSSARTMPPPPLSAPGTASSSCGHESGGAE 979
            .:|:. ||.:.:..|.|        |.:|.|..||.||.....|        |......:....:
Zfish   615 EKPKS-SSPSFTHRPLPGKSHSLPYKSRPFLPALSLSSDDDYSP--------ADDEDDDDDDDED 670

  Fly   980 NCCKRYKLEDQLCDIQFIDCGTPENVPTTQQQFASVEVHPPPKPARANQSPISSSNGASVGSS-- 1042
            ...|..:.||..|          :::|:. :.|.|:....|..|  :::|..|.....|||.|  
Zfish   671 ESDKGSEYEDMFC----------KSLPSC-RDFHSLSWAGPQTP--SSKSERSDEIAQSVGQSED 722

  Fly  1043 ---------------SSSTRYSYPSVQLG-----AKRKEQQDAKERFSYQGTFTQPGQKQESSAP 1087
                           |..|..|..||.:.     .:|:|:....|..:|.|..:.|      |:|
Zfish   723 RIPIALSLKDDSKTESLMTNESRNSVDVENNKHVLRREEESAESEEDTYFGPDSIP------SSP 781

  Fly  1088 RPVHSTNNGATLRKPRVEPVEDGQIKLHVPTPTTPARSPRYSLLLCDTESSDNSSAVNTPQYDME 1152
            .|                  |...|.:|.......| |...:.:....|:.:..|:|.|...|.|
Zfish   782 EP------------------EKNHISVHEDINRNSA-SEEQTQIKTQRETDEKESSVKTTLQDDE 827

  Fly  1153 PLMLTSAMSGVSGVSSNVQQQQLLLGVDASSSYLGSSHESLGQNINN-------HHDAEQRDMNA 1210
            ....|.                       ::..|.|:|:.     ||       ..||:..|...
Zfish   828 EQNKTE-----------------------NNEDLESAHDQ-----NNTERQEDLEEDAKDDDKGE 864

  Fly  1211 LKRELSLDLNPLQPRLPQPANRAATLPVKDQLQAAAAAMCSSPNNSNFTDNTSQSVTPSEYGYQH 1275
            .|:|.:.....||....:.|....    :::.|||........|..|..|...:....||     
Zfish   865 QKQEKTAQSEDLQQNNEENAEDEG----REEKQAAEMKDVEQNNEGNANDEEERLKDMSE----- 920

  Fly  1276 LQRQLSMHSLLATDESSPVYEDFEQTPVKMVPSPIKSTISITYKSPEKEKKPSAILE-TNFDENT 1339
                               ..|.||...:......|....:......||.....::| .|.::|.
Zfish   921 -------------------INDTEQNNEENAGEIQKQMTDMDNLGQNKEGNQENVMEINNIEQNN 966

  Fly  1340 VYEQVKLFRN---------SVTEVNQMLHERSSLKQIAEEEQHDGGAYKAAEMTQQLLQLEQEHH 1395
            ..|...|..|         ..|:|.||.....|.::.|||:|......:..|...   :..||:.
Zfish   967 ALEMQNLKLNVEENAKCEKEETQVTQMNDIEQSNEENAEEKQSQMSEVQDLEQNN---EQNQENV 1028

  Fly  1396 DHEEQQEKEPEDEEQSQLLYENIELRKPKTVYENLRGEEMKFITEEQKPNVDRIELDSLDSLPDN 1460
            ...||.|:|.|.|||.|      |......:.||.. :|||           ..||..::.  :|
Zfish  1029 TDSEQNEEENEKEEQKQ------ETEMQDNIGENTE-DEMK-----------ETELQEIEQ--NN 1073

  Fly  1461 MEHEQSSPSKSPTFSVKELANKFESSPVEQLPNFDFSVRGGSMKKPNELSVPKTMPAPVPLKKLN 1525
            .|.|:           :|...:.|...:||               .||                 
Zfish  1074 AETER-----------EEQNQEIEWQDIEQ---------------NNE----------------- 1095

  Fly  1526 SSAQKITRSLDENAFVREFGGKQLQDLSLSNKLPEVMSEVNSRRKSFDFTRPKTLNPPKRLPGMS 1590
                    .|.||....:....::|||. .|.......|.|...|..|..:....|..|.     
Zfish  1096 --------ELAENEKKEQKQENKMQDLE-QNDAENEGEEQNQETKMQDLEQNNAENEKKE----- 1146

  Fly  1591 ITEEICQKRVGEMEAITPTTENRISLIQQNNMPKEQQSSANQFLPPAGRKNVLTGVVLDRERIDK 1655
                  ||:           |.::..|:|||...|:                       :|:..:
Zfish  1147 ------QKQ-----------ETKMQDIEQNNAENEK-----------------------KEQKQQ 1171

  Fly  1656 IKEERRQQLTQKYYGDTLKSRSRTELNSEDNFPAAESLRIKSKSRGDMHA------LQKDIDMNL 1714
            .|.:..:|...:..|:..|..::.:.::||| |..|    |:|.|...:.      :|.|.|..|
Zfish  1172 NKMQDLEQNNAENEGEKQKQETKMQDSNEDN-PENE----KNKERNQENVTEINDIVQNDEDKEL 1231

  Fly  1715 KQLSRVTGGGSECTLHTGLSQG--------NGQEHLGQ--QRVRRISDEKNQNCD---------- 1759
            ||.:.:.......|......|.        |.:|:.|:  ::..::.|:...|.:          
Zfish  1232 KQETEMQNNEENATCEKEEKQATEMNDTEQNNEENAGEKPKQQTKMHDDNAANAEGHTSSSADVN 1296

  Fly  1760 --TSNGGVSGITSTSLLSVKTTAQKYGSTSKTPANKFERSQPMPR--DRLQRNSLAESNAGTNNR 1820
              |.:|..:||...:....:.|.|:..|..||.|....:::.:|.  .:.|.:.|...|......
Zfish  1297 NITISGEKAGIIQQTHSEEEITIQRRDSPRKTAAGAAHQTRAVPAVPPKPQNSKLTALNLRKRFE 1361

  Fly  1821 EKISPQ 1826
            .::|.:
Zfish  1362 NRLSQE 1367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CdGAPrNP_001260600.1 PX_domain 168..274 CDD:295365
SH3_ARHGAP32_33 299..358 CDD:212769
RhoGAP_CdGAP 420..613 CDD:239849 110/195 (56%)
FliJ 1322..1457 CDD:304890 37/144 (26%)
si:dkeyp-68b7.12XP_021324056.1 RhoGAP_CdGAP 13..207 CDD:239849 110/195 (56%)
MDN1 <692..1250 CDD:331582 148/765 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579736
Domainoid 1 1.000 185 1.000 Domainoid score I3308
eggNOG 1 0.900 - - E1_KOG1449
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR15729
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.840

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