DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and HMRA1

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_010021.1 Gene:HMRA1 / 850459 SGDID:S000000694 Length:126 Species:Saccharomyces cerevisiae


Alignment Length:63 Identity:19/63 - (30%)
Similarity:37/63 - (58%) Gaps:3/63 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 HCRRRKA---RTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK 330
            |.::.|:   ::..|....:.||:.|..::.|::.|:.|:|...|::..||:.||.|:||:.|
Yeast    64 HIKKEKSPKGKSSISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMRSK 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 18/59 (31%)
HMRA1NP_010021.1 HOX 70..126 CDD:197696 16/55 (29%)

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