DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and HB5

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_201334.1 Gene:HB5 / 836656 AraportID:AT5G65310 Length:312 Species:Arabidopsis thaliana


Alignment Length:257 Identity:69/257 - (26%)
Similarity:92/257 - (35%) Gaps:85/257 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 GFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGA----PFFGA---PGCVPELALGLGMGVNALR 270
            |||.:.      .|.|.|.:.|...:...|:.||    ..|.|   .|.:.:|. |:|...:...
plant    13 GFLPIR------HSTTDKQISPRPTTTGFLYSGAGDYSQMFDALEDDGSLEDLG-GVGHASSTAA 70

  Fly   271 HCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK-KQLR 334
            ..:||     ....|:..|||.||....|....:|:||..|||...||..||||||.:.| |||.
plant    71 EKKRR-----LGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLE 130

  Fly   335 RRDNANEPVDF----SRSEPGKQPGEATSSSGDSKHG-------KLNPGSVGG------------ 376
            |        |:    |..:..|:..::.....||..|       |||...|.|            
plant   131 R--------DYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLNVEGVKGIEENGALKAVEA 187

  Fly   377 -----------------------TPTQ-PTSEQQLQMCLMQQGYS----TDDYSDLEADSGD 410
                                   .||. ||||...:|      :|    |:::.|..|||.|
plant   188 NQSVMANNEVLELSHRSPSPPPHIPTDAPTSELAFEM------FSIFPRTENFRDDPADSSD 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 23/56 (41%)
HB5NP_201334.1 Homeodomain 72..125 CDD:459649 23/57 (40%)
HALZ 127..168 CDD:460477 10/48 (21%)

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