DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and HB51

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_195999.2 Gene:HB51 / 831723 AraportID:AT5G03790 Length:235 Species:Arabidopsis thaliana


Alignment Length:123 Identity:39/123 - (31%)
Similarity:57/123 - (46%) Gaps:19/123 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 PSSGTYKSV-----DPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRR-----RKAR 278
            |.|.::.|:     |||  :..|...|....|....|||..    ..:||.|....     :|.|
plant    22 PESSSFNSLHSFNFDPY--AGNSYTPGDTQTGPVISVPESE----KIMNAYRFPNNNNEMIKKKR 80

  Fly   279 TVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK-KQLRR 335
              .:..||:.||:.|:.:..|.:..:|:|:..|||...|:..||||||.:.| |||.:
plant    81 --LTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQ 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 21/56 (38%)
HB51NP_195999.2 Homeodomain 77..130 CDD:459649 20/54 (37%)
HALZ 132..166 CDD:460477 3/5 (60%)

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