DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and HAT22

DIOPT Version :9

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_195493.1 Gene:HAT22 / 829935 AraportID:AT4G37790 Length:278 Species:Arabidopsis thaliana


Alignment Length:174 Identity:43/174 - (24%)
Similarity:63/174 - (36%) Gaps:45/174 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 PPPLNGGSGASNGVLYPNAPYTDHGFLQMTLGY-LSPSSGTYK-----SVDPYFLSQASLFGGAP 247
            |.|.|     .|..:..::...||.|:::.... ||.|..:||     ........|.|...|..
plant    19 PTPNN-----YNHAIKKSSSTVDHRFIRLDPSLTLSLSGESYKIKTGAGAGDQICRQTSSHSGIS 78

  Fly   248 FFGAPGCVP---ELALGLG-----------------------MGVNALRHCRRRKARTVFSDPQL 286
            .|.: |.|.   |::.|.|                       .||:|.:..|..|.::..     
plant    79 SFSS-GRVKREREISGGDGEEEAEETTERVVCSRVSDDHDDEEGVSARKKLRLTKQQSAL----- 137

  Fly   287 SGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK 330
              ||..|:....|:..::..||..|.|...||:.||||||.:.|
plant   138 --LEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTK 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeobox 278..330 CDD:278475 16/51 (31%)
HAT22NP_195493.1 Homeobox 129..179 CDD:278475 18/56 (32%)
HALZ 181..224 CDD:128634
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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