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Protein Alignment bsh and PDF2
DIOPT Version :9
Sequence 1: | NP_477350.2 |
Gene: | bsh / 35266 |
FlyBaseID: | FBgn0000529 |
Length: | 429 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001329475.1 |
Gene: | PDF2 / 825828 |
AraportID: | AT4G04890 |
Length: | 743 |
Species: | Arabidopsis thaliana |
Alignment Length: | 127 |
Identity: | 36/127 - (28%) |
Similarity: | 55/127 - (43%) |
Gaps: | 28/127 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 270 RHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRM------- 327
||.:| |:..||..|:...:....:|.||:..|.|...|||.||||:|.
plant 68 RHTQR----------QIQELESFFKECPHPDDKQRKELSRDLNLEPLQVKFWFQNKRTQMKAQSE 122
Fly 328 KHKKQLRRRDNANEPVDFSRSEPGKQPGEATSSSGDSKHGKLNPGSVGGTPTQPTSEQQLQM 389
:|:.|:.:.|| |..|:|..:.. ||.|::.....| .|.::| .....||.|::
plant 123 RHENQILKSDN-----DKLRAENNRYK-EALSNATCPNCG--GPAAIG---EMSFDEQHLRI 173
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
bsh | NP_477350.2 |
Homeobox |
278..330 |
CDD:278475 |
17/58 (29%) |
PDF2 | NP_001329475.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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