DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and HB6

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_565536.1 Gene:HB6 / 816775 AraportID:AT2G22430 Length:311 Species:Arabidopsis thaliana


Alignment Length:193 Identity:49/193 - (25%)
Similarity:73/193 - (37%) Gaps:63/193 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 QLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK-KQLR-------------- 334
            |:..|||.||.:..|....:|:||..|||...||..||||||.:.| |||.              
plant    70 QVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLR 134

  Fly   335 ------RRDNANEPVDFSRSEP------GKQPGE------ATSSSGDSKHGKLN-PGSVGGTPTQ 380
                  ||||.:...:.|:.:.      |::..|      .|.|....|..::: |..:...|:.
plant   135 HNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESDISVKEEEVSLPEKITEAPSS 199

  Fly   381 PTSEQQLQMCLMQQGYSTDDYSDL------------------EADSGD------EDNSSDVDI 419
            |.     |......|.:...::||                  .:||.|      |::||:|.:
plant   200 PP-----QFLEHSDGLNYRSFTDLRDLLPLKAAASSFAAAAGSSDSSDSSALLNEESSSNVTV 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 22/46 (48%)
HB6NP_565536.1 Homeodomain 62..115 CDD:459649 21/44 (48%)
HALZ 117..158 CDD:460477 8/40 (20%)

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