Protein Alignment bsh and Hhex

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_077361.1
• Gene: Hhex / 79237
• RGDID: 619932
• Length: 271
• Species: Rattus norvegicus
• Alignment Length: 287
• Identity: 84/287 - (29%)
• Similarity: 112/287 - (39%)
• Gaps: 73/287 - (25%)

  Fly   172 GAAQHPPVPTTQPQPPPPPPLNG--GSGASNGVLYPNAPYTDHGFLQMTLGYLSPSSGTYK--SV 232
            |...:.|.|..||..|.|..::.  |.|.:.....|..|..:..|..:...|.:|   .|:  .|
  Rat    15 GVPLYAPTPLLQPAHPTPFYIDDILGRGPAAPTPTPTLPSPNSSFTSLVSSYRTP---VYEPTPV 76

  Fly   233 DPYF-----LSQASLFG----GAPFFGAPGCVPELALGLGMGVNALRH----------------C 272
            .|.|     .:.|:.:|    |.|.:..|..|.:....|      |||                .
  Rat    77 HPAFSHHPAAALAAAYGPGGFGGPLYPFPRTVNDYTHAL------LRHDPLGKPLLWNPFLQRPL 135

  Fly   273 RRRKARTV-FSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRR 336
            .:||...| ||:.|...|||:||.|:|||.|||..||..|.|||.||||||||||.|.::..:..
  Rat   136 HKRKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQEN 200

  Fly   337 DNAN-----EPVDFSRSEPGKQPGEAT-SSSGDSKHGKLNPGSVGGTPTQPTSEQQLQMCLMQQG 395
            ..:|     :.:|.|..:....|.|.. .:|.||.....:|.|    |..|.||.
  Rat   201 PQSNKKDELDSLDTSCDQGQDLPSEQNKGASLDSSQCSPSPAS----PEDPESEI---------- 251

  Fly   396 YSTDDYSDLEADSGDEDNSSDVDIVGD 422
                          .||:..:|||.||
  Rat   252 --------------SEDSDQEVDIEGD 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	35/56 (63%)
Hhex	NP_077361.1	Homeodomain	137..195	CDD:459649	35/57 (61%)