DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Obox1

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_082078.1 Gene:Obox1 / 71468 MGIID:1918718 Length:204 Species:Mus musculus


Alignment Length:233 Identity:49/233 - (21%)
Similarity:82/233 - (35%) Gaps:62/233 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 LGSGAAQHP--------PVPTTQPQPPPP-----------PPLNGGSGASNGVLYPNAPYTDHGF 214
            :..|.:.||        |:..:...|..|           |.:..||...:.:..|     :...
Mouse     1 MAEGPSLHPKLQVDSNIPIEISSQIPQEPARNLAFQMRQSPLVTPGSTTKSSLSVP-----ERNL 60

  Fly   215 LQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKART 279
            |:......|..||.....|.|...|........|                          ||.||
Mouse    61 LKQESQGPSRQSGCMLLSDKYVNKQTGPMASRKF--------------------------RKERT 99

  Fly   280 VFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQ--------LRRR 336
            |::..|...|:|.|:..:|.:..:.||||.::|:::.::|.||:|.|.|:::.        |...
Mouse   100 VYTKEQQGLLQKHFDECQYPNKKKIVELALSVGVTKREIKIWFKNNRAKYRRMNLQNIEQVLPES 164

  Fly   337 DNANEPVDFSRSEP--GKQPGEATSSS--GDSKHGKLN 370
            :.:::.|..|...|  ....||:..|.  |:....|.|
Mouse   165 NGSSKAVSESTHFPVVASDNGESMCSGTFGEDSIPKFN 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 21/55 (38%)
Obox1NP_082078.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..73 7/49 (14%)
Homeodomain 95..151 CDD:459649 21/55 (38%)

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