DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Mnx1

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001258203.1 Gene:Mnx1 / 682076 RGDID:1588091 Length:403 Species:Rattus norvegicus


Alignment Length:338 Identity:99/338 - (29%)
Similarity:129/338 - (38%) Gaps:102/338 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 PHKHPSQHSHPPQSHPPASASASATATARSNQAASGYA------GEDYGKSMHSTPRSNHHSRHG 156
            ||.|         :||.|:|:|:|.|.|   .||.|.|      |...|..:   |.......|.
  Rat   113 PHHH---------AHPGAAAAAAAAAAA---AAAGGLALGLHPGGAQGGAGL---PAQAALYGHP 162

  Fly   157 TSHYNGDQISQQLGSGAAQHPPVPTTQPQ------PPPPPPLNGGSGASNGVLYPNAPYTDHGFL 215
            ...|:....:..|   |.|||.:..:.||      ..|..|:..|:|...         .|....
  Rat   163 VYSYSAAAAAAAL---AGQHPALSYSYPQVQGAHPAHPADPIKLGAGTFQ---------LDQWLR 215

  Fly   216 QMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKARTV 280
            ..|.|.:.|..       |.|.|||.                        .|.|..|||  .||.
  Rat   216 ASTAGMILPKM-------PDFSSQAQ------------------------SNLLGKCRR--PRTA 247

  Fly   281 FSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNANEPVDF 345
            |:..||..||.:|:..:|||.|:|.|:||:|.|:|||||.||||||||.|:..:.::.|.:    
  Rat   248 FTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAAQ---- 308

  Fly   346 SRSEPGKQPGEATSSSGDSKHGKLNPGSVGGTPTQPTSEQQLQMCLMQQGYSTDDYS-----DLE 405
               |..||.|   |..|..|         |||      |::.:..|:....|.|..|     ||.
  Rat   309 ---EAEKQKG---SGGGAGK---------GGT------EEKTEEELLGPPVSGDKASGRRLRDLR 352

  Fly   406 ADSGDEDNSSDVD 418
            ....|||...:.|
  Rat   353 DSDPDEDEDDEED 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 31/55 (56%)
Mnx1NP_001258203.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 32..81
Homeodomain 242..298 CDD:459649 33/57 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 299..403 22/92 (24%)
Blue background indicates that the domain is not in the aligned region.

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