DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Barx2

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001414382.1 Gene:Barx2 / 679701 RGDID:1584840 Length:290 Species:Rattus norvegicus


Alignment Length:127 Identity:49/127 - (38%)
Similarity:78/127 - (61%) Gaps:5/127 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 RHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLR 334
            |..:.|::||:|::.||.||||:|:.|:|||||:|::||.:|||::.|||||:||||||.||.:.
  Rat   140 RQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVL 204

  Fly   335 R--RDNANEPVDFSR--SEPGKQPGEATSSSGDSKHGKLNPGSVGGTPTQPTSEQQLQMCLM 392
            :  ::...:|....:  |.|..:..||..........:...||:.| ..:|...|:.:.||:
  Rat   205 KGGQEAPTKPKGRPKKNSIPTSEEIEAEEKMNSQAQSQEQLGSLQG-QEEPRDPQEPKACLV 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 34/55 (62%)
Barx2NP_001414382.1 None

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