DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Nkx1-1

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_035450.1 Gene:Nkx1-1 / 672284 MGIID:109346 Length:440 Species:Mus musculus


Alignment Length:312 Identity:87/312 - (27%)
Similarity:116/312 - (37%) Gaps:84/312 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 PSQHSHPPQSHPPASASASATATARSNQAASGYAGEDYGKSMHSTPRSNHHSRHGTSHYNG---- 162
            |:.....|::.....|.::||..|.:..|....||:.|        |::....:|.|..:|    
Mouse   124 PAASGRSPRAELERRALSAATGVAAAAGAEPTSAGDSY--------RADEAEANGYSSGSGRSPT 180

  Fly   163 ----DQISQQLGSGAAQHPPVPTTQPQPPPPPPLNGGSG--ASNGVLYPNAPYTDHGFLQMTLGY 221
                |:..:.  ....:.|.|...|....|    .||||  .:.|...|.|...:          
Mouse   181 ADSEDEAPED--EDEEEAPEVQDAQGTEEP----RGGSGGLGARGSGCPGAAEVE---------- 229

  Fly   222 LSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLG------MGVNALRHCRR------ 274
            .||...|         :.....|.:|  |||| .|..|.|.|      .|.......:|      
Mouse   230 ASPVDDT---------AAPGPRGNSP--GAPG-PPATATGAGSAGSTPQGAAVTTKPKRKRTGSD 282

  Fly   275 ------RKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQL 333
                  |:|||.|:..||..||.:|:..||||..||:.||.:|.|:|||||.||||||.|.||| 
Mouse   283 SKSGKPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ- 346

  Fly   334 RRRDNANEPVDFSRSEPGKQPGEATSSSGDSKHGKLNPGS--VGG-TPTQPT 382
                           .||......|...|....| ..||:  .|| :|..|:
Mouse   347 ---------------NPGADTSAPTGGGGGPGPG-AGPGAGLPGGLSPLSPS 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 32/55 (58%)
Nkx1-1NP_035450.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..82
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..291 37/181 (20%)
Homeodomain 289..345 CDD:459649 32/55 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..387 15/58 (26%)
Blue background indicates that the domain is not in the aligned region.

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