DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and vox

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_571773.1 Gene:vox / 64807 ZFINID:ZDB-GENE-010108-1 Length:242 Species:Danio rerio


Alignment Length:169 Identity:52/169 - (30%)
Similarity:76/169 - (44%) Gaps:33/169 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 PPVP-TTQPQPP---------PPPPLNGGSGASNGVLYPNAPYTDHGFLQMTLGYLSPSSGTYKS 231
            |.|| ..||:||         |.|.:|...                  |:......:|:..|.::
Zfish    31 PHVPCVVQPRPPTSYDKVYLQPKPKINKAE------------------LKTESSKETPAQVTPRN 77

  Fly   232 V-DPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEG 295
            . .|.|...:....|   :.:.....|.| .:..|.:|.:....|:.||.|:..|:..|||.|..
Zfish    78 CSSPSFSENSGYSSG---YESEAAASECA-SVEDGHDAEKDGATRRIRTKFTPEQIDKLEKIFNK 138

  Fly   296 QRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLR 334
            .:||...|||:.|..|||||||::|||||||||.|::::
Zfish   139 HKYLDAGERVKTALKLGLSETQIRTWFQNRRMKLKREVQ 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 31/55 (56%)
voxNP_571773.1 Homeodomain 118..174 CDD:459649 31/55 (56%)

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