DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and barx1

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001020120.1 Gene:barx1 / 553644 ZFINID:ZDB-GENE-050522-28 Length:248 Species:Danio rerio


Alignment Length:337 Identity:91/337 - (27%)
Similarity:128/337 - (37%) Gaps:110/337 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 KHPSQ---HSHPPQSHPPASASASATATARSNQAASGYAGEDYGKSMHSTPRSNHHSRHGTSHYN 161
            :||.:   |.:||.:|          ...||::                              |.
Zfish     2 QHPLEIGAHYYPPDAH----------LDQRSHR------------------------------YR 26

  Fly   162 GDQISQQLGSGAAQHPPVPTTQPQPPPPPPLNGGSGASNGV--LYPNAPYTDH--------GFLQ 216
            ...|.:.|    ..||....:.|.         |.....||  |....||.:|        |.|:
Zfish    27 SFMIEEIL----TDHPDQKVSSPT---------GDLLKFGVHALLSARPYHNHLVLKADQTGILK 78

  Fly   217 MTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGM------GVNALRHCRR- 274
            ..:..||.|.|...|        ::|..||...........|.|.|.:      |.:|:...:: 
Zfish    79 FPVSPLSCSLGAPLS--------SALLSGAAGLQVGSSSHHLPLDLHLRGKLDPGADAVSKTKKG 135

  Fly   275 RKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNA 339
            |::||||::.||.|||||||.|:|||||:|::||.:||||:.|||||:||||||.||.:.:....
Zfish   136 RRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGL 200

  Fly   340 NEPVDFSRSEPGKQPGEATSSSGDSKHGKLNPGSVGGTPTQPTSEQQLQMCLMQQGYSTDDYSDL 404
            ..|               |...|..|...:           ||||   |:...::....|..||.
Zfish   201 ESP---------------TKPKGRPKKNSI-----------PTSE---QLSEQERTREADRLSDG 236

  Fly   405 EADSGDEDNSSD 416
            .|.|..:.|..:
Zfish   237 GASSLSDANQEE 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 38/55 (69%)
barx1NP_001020120.1 Homeodomain 136..192 CDD:459649 38/55 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..248 15/79 (19%)

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