DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Dlx6

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001414318.1 Gene:Dlx6 / 500023 RGDID:1561539 Length:298 Species:Rattus norvegicus


Alignment Length:322 Identity:88/322 - (27%)
Similarity:117/322 - (36%) Gaps:94/322 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 ASGYAGEDYGKSMHSTPRSNHHSRHGTSHYNGDQISQQLGSGAAQHPPVPTTQPQPPPPPP---L 192
            |.|..|:|..||...........:.........|..||     .|.||     |.||||||   .
  Rat     8 ADGLEGQDSSKSAFMEFGQQQQQQQQQQQQQQQQQQQQ-----QQQPP-----PPPPPPPPQPHS 62

  Fly   193 NGGSGASNGVLYP--------------------------NAPYTDHG---FLQMTLG---YLSPS 225
            ...|.|..|..||                          .:||...|   :...:|.   |:|.|
  Rat    63 QQTSPAMAGAHYPLHCLHSAAAAAAAAGSHHHHHQHHHHGSPYASGGGNSYNHRSLAAYPYMSHS 127

  Fly   226 SGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELAL---------GLGMGVNALRHCRRRKARTVF 281
            ..:     ||..|..:....|...|......:..:         |.|..:        ||.||::
  Rat   128 QHS-----PYLQSYHNSSAAAQTRGDDTDQQKTTVIENGEIRFNGKGKKI--------RKPRTIY 179

  Fly   282 SDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNANEPVDFS 346
            |..||..|..||:..:||:.|||.|||.:|||::||||.||||:|.|.||.|::..|.:|     
  Rat   180 SSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLLKQGSNPHE----- 239

  Fly   347 RSEPGKQPGEATSS------------SGDSKHGKLNPGSV-------GGTPTQPTSEQQLQM 389
             |:|  .||.|..|            |..:|...:.|.|.       ..:|.|.|.::...|
  Rat   240 -SDP--LPGSAALSPRSPALPPVWDVSASAKGVSMPPNSYMPGYSHWYSSPHQDTMQRPQMM 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 31/55 (56%)
Dlx6NP_001414318.1 None

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