Protein Alignment bsh and hoxa5

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_001011405.1
• Gene: hoxa5 / 496880
• XenbaseID: XB-GENE-486061
• Length: 274
• Species: Xenopus tropicalis
• Alignment Length: 298
• Identity: 77/298 - (25%)
• Similarity: 113/298 - (37%)
• Gaps: 92/298 - (30%)

  Fly    57 ASNNNNSSDTNGIAANTNNYAPKSSRNAV-KSARSAFAHDNNPHKHPSQHS---HPPQSHPPASA 117
            :|.|....||..:.::...|.......:| :||.:.|:.::....:||..|   .|..:.|.|||
 Frog    28 SSVNEQYRDTTSMHSSRYGYGYNGMDLSVGRSASNHFSANDRARNYPSNPSSSTEPRYNQPAASA 92

  Fly   118 SA------SATATARSNQAASGYAGEDYGKSMHSTPRSNHHSRHGTS-HYNGDQISQQLG----- 170
            .:      ..||.|.|..:.|...|::...:.::|..::.:|..||| |.|.|.:....|
 Frog    93 HSPPPDPLPCTAVATSPVSDSHQGGKNSITNSNNTTSNSSNSSTGTSTHINRDGLGASSGAEDDA 157

  Fly   171 -------SGAAQHPPVPTTQPQPPPPPPLNGGSGASNGVLYPNAPYTDHGFLQMTLGYLSPSSGT 228
                   |......|.|:.|||                 :||          .|...::|..:
 Frog   158 PASSDQASSQNSQSPAPSVQPQ-----------------IYP----------WMRKLHISHDN-- 193

  Fly   229 YKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKRF 293
                          .||          ||                .::|||.::..|...|||.|
 Frog   194 --------------IGG----------PE----------------GKRARTAYTRYQTLELEKEF 218

  Fly   294 EGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKK 331
            ...|||:...|:|:|.||.|||.|:|.||||||||.||
 Frog   219 HFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	29/55 (53%)
hoxa5	NP_001011405.1	Homeodomain	200..256	CDD:459649	29/55 (53%)