Protein Alignment bsh and hbn

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_788420.1
• Gene: hbn / 47894
• FlyBaseID: FBgn0008636
• Length: 409
• Species: Drosophila melanogaster
• Alignment Length: 352
• Identity: 75/352 - (21%)
• Similarity: 106/352 - (30%)
• Gaps: 115/352 - (32%)

  Fly   103 SQH--SHP--PQSHPPASASASATATARSNQAASGYAGEDYGKSMHSTPRS----------NHHS 153
            |||  .||  |.:..||....|..:..|:..:.....|..:......||..          .||.
  Fly     7 SQHHQHHPIMPPAMRPAPVQESPVSRPRAVYSIDQILGNQHQIKRSDTPSEVLITHPHHGHPHHI 71

  Fly   154 RH-------GTSHYNGDQISQQLGSGAAQHPPVPTTQPQ-------PPPPPPLNGGSGASNGVLY 204
            .|       |::|.:..|  ||..|....|......|.|       ...|...:||....|.
  Fly    72 HHLHSSNSNGSNHLSHQQ--QQQHSQQQHHSQQQQQQQQLQVQAKREDSPTNTDGGLDVDND--- 131

  Fly   205 PNAPYTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMG--VN 267
                                                               .||:..|..|  ::
  Fly   132 ---------------------------------------------------DELSSSLNNGHDLS 145

  Fly   268 ALRHCRR-RKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKK 331
            .:...|: |::||.|:..||..||:.||..:|.....|.:||..|.|||.:|:.||||||.|.:|
  Fly   146 DMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRK 210

  Fly   332 QLRRRDNANEPVDFSRSEPGKQ-------------PGEATSSSGD------SKHGKLNPGSVGGT 377
              |.:....:...:...|.|..             ||...|...:      :.|...||.:....
  Fly   211 --REKFMNQDKAGYLLPEQGLPEFPLGIPLPPHGLPGHPGSMQSEFWPPHFALHQHFNPAAAAAA 273

  Fly   378 PTQPTSEQQLQMCLMQQGYSTDDYSDL 404
            ...|..       ||...|...::..|
  Fly   274 GLLPQH-------LMAPHYKLPNFHTL 293

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	26/55 (47%)
hbn	NP_788420.1	Homeodomain	154..210	CDD:459649	26/55 (47%)