DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and E5

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster


Alignment Length:504 Identity:125/504 - (24%)
Similarity:180/504 - (35%) Gaps:157/504 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MLNEASLSPADAHAHANATTPTHSKAAAMASATTMLTTKTPFSIEHILFQN--------LNSASN 59
            ||..|..||..:.:.:.|.:.|...|::..||:.....|..|||:.|:.::        ::..|:
  Fly    11 MLPMAPTSPFVSSSSSVAASSTSVSASSTVSASASSKPKLAFSIDSIVGESSTRSAPLRVSVISS 75

  Fly    60 NNNSSDTNGIAANTNNYAPKSSRNAVK-SARSAFAHDNNPHKHPSQHSHPPQSHPPASAS-ASAT 122
            ....|::.....||||...::.|..:. ..|.:.....:|.:.|...|..|   |.|..: |:|.
  Fly    76 PPPRSESPASPTNTNNSGRRTPRGYIYCRRRDSLDRSRSPQRSPVSRSPSP---PNAGGNPAAAG 137

  Fly   123 ATARSNQAASG---------------------------------YAGEDYGKSMHSTP--RSNHH 152
            .||:|...:||                                 .||..:..| ...|  .:...
  Fly   138 NTAKSGDPSSGTGNPPTLIRPLPLPAPNLALIGNRTSPNAMAVRMAGPPHPPS-QPPPFLAAQFQ 201

  Fly   153 SRHGTSHYNGDQISQQLGSGAAQHPPVPTTQPQPPPP--PPLNGGSGASNGVLYPNAPYTDHGFL 215
            .....:|::..|..||    ..|.|||||..|..|.|  ||     |.....::|..|:..|   
  Fly   202 MAAALAHHHQQQQQQQ----QQQLPPVPTGPPHGPHPHLPP-----GQIPLGIFPGGPHPGH--- 254

  Fly   216 QMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCV-------PELALGLGMGVNALRHCR 273
                   .|..|.:                 ||..||..:       |.|         ..||.|
  Fly   255 -------PPPHGHH-----------------PFGSAPHLIRDSYPLYPWL---------LSRHGR 286

  Fly   274 ----------------RRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWF 322
                            .::.||.||..||..||..|||..|:...||.:||..|.|:|||||.||
  Fly   287 IFPRFPGNFLFQPFRKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWF 351

  Fly   323 QNRRMKHKKQLRRRDNANEPVDFSRSEPGKQPGEATSSSG--DSKHGKLNPGSVGGTPTQPTSEQ 385
            ||||.|||:..:...:.::    ::|..|...|......|  |:||    .||            
  Fly   352 QNRRTKHKRMQQEGGDGSD----TKSNKGSSSGGGGGGDGEDDAKH----DGS------------ 396

  Fly   386 QLQMCLMQQGY----STDDYSDLEADSGDEDNSSDVDIVG---DAKLYQ 427
                   |..|    ..:|..::|.|  |||...|:|..|   ||:.:|
  Fly   397 -------QHSYEDAEDPEDEDEIEED--DEDEVIDMDDYGSEMDAEEHQ 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 31/55 (56%)
E5NP_524825.1 Homeodomain 304..360 CDD:459649 31/55 (56%)

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