DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bsh and emx1

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001005459.1 Gene:emx1 / 448058 XenbaseID:XB-GENE-920144 Length:233 Species:Xenopus tropicalis


Alignment Length:246 Identity:70/246 - (28%)
Similarity:90/246 - (36%) Gaps:69/246 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 SAFAHDNNPHKHPSQHSHPPQSHPPASASASATATARSNQAASGYAGEDYGKSMHSTPRSNHHSR 154
            |..|.||           |..|..|...:|.....|.:....||:. ...|:|:::.|.......
 Frog    14 SLVAKDN-----------PLSSEEPLRPAALPYPGAPAEAFVSGFP-SPAGRSLYNNPELVFPET 66

  Fly   155 HGTSHYNGDQISQQLGSGAAQHPPVPTTQPQPPPPPPLNGGSGASNGVLYP---NAPYTDHGFLQ 216
              .||........|||:...||   |.:...|....|||         .||   ...:..|.|  
 Frog    67 --VSHPPLTVHPHQLGASHLQH---PHSFFAPQHRDPLN---------FYPWVLRNRFFGHRF-- 115

  Fly   217 MTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKARTVF 281
                    ..|.        :||.||....||...|                      ::.||.|
 Frog   116 --------QGGD--------VSQESLLLHGPFARKP----------------------KRIRTAF 142

  Fly   282 SDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQ 332
            |..||..||:.||...|:...||.:||::|.|||||||.||||||.|:|:|
 Frog   143 SPSQLLRLERAFEKNHYVVGAERKQLASSLSLSETQVKVWFQNRRTKYKRQ 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 30/55 (55%)
emx1NP_001005459.1 Homeodomain 136..192 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..233 1/2 (50%)

Return to query results.
Submit another query.