DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and dlx5

DIOPT Version :9

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001004778.1 Gene:dlx5 / 447997 XenbaseID:XB-GENE-853057 Length:289 Species:Xenopus tropicalis


Alignment Length:304 Identity:81/304 - (26%)
Similarity:116/304 - (38%) Gaps:108/304 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 HPPQSHPPASASASATATARSNQAASGYAGE-----------DYGKSMHSTPRSNHHSRHGTSHY 160
            ||.|..|....|   |||.....:..|.||.           .|||:::    :..:..||    
 Frog    23 HPSQDSPTLPES---TATDSGYYSPGGAAGHPHHGYCSPTSATYGKALN----AYQYQYHG---- 76

  Fly   161 NGDQISQQLGSGAAQHPPVPTTQPQPPPPPPLNGGSGASNGVLYPNAPYTDHGFLQMTLGYLSP- 224
                                           :||.:|.     ||...|:|:       ||.|| 
 Frog    77 -------------------------------MNGAAGN-----YPGKAYSDY-------GYGSPY 98

  Fly   225 -----SSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALG---LGMGVNALRHCRRRKARTVF 281
                 .||.|..|.|                 |...||..:.   :.| ||. :..:.||.||::
 Frog    99 HPHHQYSGAYNRVQP-----------------PSSQPEKEVSEPEVRM-VNG-KPKKIRKPRTIY 144

  Fly   282 SDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNANEPVDFS 346
            |..||:.|::||:..:||:.|||.|||.:|||::||||.||||:|.|.||.::   |...|.:.|
 Frog   145 SSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMK---NGELPPEHS 206

  Fly   347 RSEPGK------------QPGEATSSSGDSKHGKLNPGSVGGTP 378
            .|....            :|..::.|.....|...:|.:.|.:|
 Frog   207 PSSSDPMACNSPQSPVVWEPQGSSRSLSHHPHVHSHPQASGSSP 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeobox 278..330 CDD:278475 29/51 (57%)
dlx5NP_001004778.1 DLL_N 26..118 CDD:315147 31/162 (19%)
Homeobox 140..193 CDD:306543 29/52 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D574097at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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