DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bsh and zfh2

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_524623.2 Gene:zfh2 / 43795 FlyBaseID:FBgn0004607 Length:3005 Species:Drosophila melanogaster


Alignment Length:388 Identity:83/388 - (21%)
Similarity:125/388 - (32%) Gaps:104/388 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SLSPA---DAHAHANATTPTHSKAAAMASATTMLTTKTPFSIEHILFQNLNSASNNNNSSDTN-- 67
            ||.|:   :..:..|||:...:...|.||.....:...|.|......::.||:.|.::....|  
  Fly  1905 SLPPSGNINLSSKENATSKVLAAGKANASGPVTFSATVPVSTPLSRPESTNSSGNISDYIGNNIF 1969

  Fly    68 -GIAANTNNYAPKSSRNAVKS-------ARSAFAHDNNPHKHPSQHSHPPQSH----PPASASAS 120
             |...:.....|.|....:||       ..:.||:....|   |..|...|..    ||.....:
  Fly  1970 FGQLGSKEQILPYSLDGQIKSEPQDDMIGATDFAYQTKQH---SSFSFLKQQQDLVDPPEQCLTN 2031

  Fly   121 ATATARSNQAASGYAGEDYGKSMHSTPRSN---HHSRHGTSHYNGDQISQQLGSGAAQHPPVPTT 182
            ..|....:|  |..||.....:..|..:.|   ..|..|:|    |.:|:               
  Fly  2032 QNADTAQDQ--SLLAGSSLASNCQSQQQINIFETKSESGSS----DVLSR--------------- 2075

  Fly   183 QPQPPPPPPLNGGSGASNGVLYPNAPYTDHGFLQMTLGYLSPSSG-------------------- 227
                 ||.|.:|.:|...|.:        :..|...|..:..:.|                    
  Fly  2076 -----PPSPNSGAAGNVYGSM--------NDLLNQQLENMGSNMGPPKKMQIVGKTFEKNVAPMV 2127

  Fly   228 TYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKR 292
            |..||...|.|.:|....:....:.|                    :|..||.|:|.|:..|::.
  Fly  2128 TSGSVSTQFESNSSNSSSSSSSTSGG--------------------KRANRTRFTDYQIKVLQEF 2172

  Fly   293 FEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNANEPVD--FSRSEPGKQ 353
            ||...|....:...|:..|.||...:..||||.|.|.:|...     |:|.:  |...|..||
  Fly  2173 FENNSYPKDSDLEYLSKLLLLSPRVIVVWFQNARQKQRKIYE-----NQPNNTLFENEETKKQ 2230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 20/55 (36%)
zfh2NP_524623.2 C2H2 Zn finger 561..581 CDD:275368
C2H2 Zn finger 616..633 CDD:275368
C2H2 Zn finger 1515..1542 CDD:275371
C2H2 Zn finger 1543..1564 CDD:275371
Homeodomain 1798..1857 CDD:459649
Homeodomain 2155..2211 CDD:459649 20/55 (36%)
Homeodomain 2761..2817 CDD:459649
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.