Protein Alignment bsh and nkx6.1

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_001002475.1
• Gene: nkx6.1 / 436748
• ZFINID: ZDB-GENE-040718-178
• Length: 312
• Species: Danio rerio
• Alignment Length: 341
• Identity: 90/341 - (26%)
• Similarity: 125/341 - (36%)
• Gaps: 104/341 - (30%)

  Fly    87 SARSAF---------AHDNNPHKHPSQHSHPPQSHPPASASASATATARSN----------QAAS 132
            |.:|||         .|.....|.|...::|..|..||| |.|.|||:.:.          :.:|
Zfish    10 SRQSAFLLNTPPLAALHSMTEMKTPLYPAYPLSSTGPAS-STSPTATSPNPGGIPVSSPGIKTSS 73

  Fly   133 GYAGEDYGKSMHSTPRSNHHSRHGTSHYNGDQISQQLGSGAAQHPPVPTTQPQ-----PPPPPPL 192
            |.          |...|.......|.|...|.:|:.  |.|.....:.:..|:     |||||.|
Zfish    74 GL----------SALASAQQCAIATPHGINDILSRP--SVACSPAGILSGLPRFSSLSPPPPPGL 126

  Fly   193 NGGSGASNGVLYPNAPYTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPG---- 253
                                        |.|||:... :|..|......|.|..|.|. ||
Zfish   127 ----------------------------YFSPSAAAV-AVARYPKPLTELPGRTPIFW-PGVMQS 161

  Fly   254 ---------CVPELALGLGMGVNAL---RHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVE 306
                     |.|.        .|::   :..:|:..|..||..|:..|||.||..:||:.|||..
Zfish   162 PHWRDARFACSPH--------QNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERAR 218

  Fly   307 LATALGLSETQVKTWFQNRRMK-HKKQLRRRDNANEPVDFSRSEPGKQPGEATSSSGDSKHGKLN 370
            ||.:||::|:|||.||||||.| .|:......:|.:..|   ||..:..|.:.:...|..:.|
Zfish   219 LAYSLGMTESQVKVWFQNRRTKWRKRHAAEMASAKKKQD---SETERLKGASENEDDDDDYNK-- 278

  Fly   371 PGSVGGTPTQPTSEQQ 386
                   |..|.|:.:
Zfish   279 -------PLDPNSDDE 287

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	29/56 (52%)
nkx6.1	NP_001002475.1	Homeodomain	185..243	CDD:459649	30/57 (53%)