DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and meox1

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001002450.2 Gene:meox1 / 436723 ZFINID:ZDB-GENE-040718-149 Length:253 Species:Danio rerio


Alignment Length:247 Identity:67/247 - (27%)
Similarity:80/247 - (32%) Gaps:83/247 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 PLNGGSGASNGVL-YPNAPYT---DHGFLQMT---LGYLSPSSGTYKSVD--------------- 233
            |.:|||||  |:. |..||:.   .|.||..|   ...|.|:...|...|               
Zfish    25 PHSGGSGA--GIQPYQQAPFALHQKHDFLAYTDFSSSCLVPAPHAYPREDRLYPETHSGYQRTEW 87

  Fly   234 ------PYFLSQASLFGGAPFFGA--------------PGC---------VP------------- 256
                  |....|....|.|...||              .||         ||             
Zfish    88 QFSPCEPRGRGQEPCQGAAEAVGAEMDSAGGDRLAGAVTGCLEGDYSPQSVPAVDTEKKSSKRKR 152

  Fly   257 ELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTW 321
            |:.........|..:|:.||.||.|:..||..||..|....||:...|.|:|..|.|:|.|||.|
Zfish   153 EVTDIQDSSFKADSNCKARKERTAFTKEQLRELEAEFTHHNYLTRLRRYEIAVNLDLTERQVKVW 217

  Fly   322 FQNRRMKHKKQLRRRDNANEPVDFSRSEPGKQPGEATSSSGDSKHGKLNPGS 373
            |||||||.|:                 ..|.||........|......:|.|
Zfish   218 FQNRRMKWKR-----------------VKGGQPASPHDLEADELDSAASPSS 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 29/55 (53%)
meox1NP_001002450.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..158 3/21 (14%)
Homeodomain 171..227 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 226..253 7/44 (16%)

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