DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and lbl

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster


Alignment Length:441 Identity:96/441 - (21%)
Similarity:153/441 - (34%) Gaps:120/441 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SPADAHAHANATTPTHSKAAAMASATTMLTTKTPFSIEHILFQNLNSASNNNNSSDTNGIAANTN 74
            |||::.....:.:|...::..|.....:   ::|.|:||...::......:.:.:|..|.....:
  Fly     7 SPANSDVSVGSPSPPPLRSLNMKRLRLL---RSPISLEHDRQKSSPVRVKSFSIADILGRGHEED 68

  Fly    75 NYAPKSSR----NAVKSARSAFAHDNNPHKHPSQHSHPP-------------------------- 109
            ....|..|    ||:....:..|..|...:.|...:.||                          
  Fly    69 RVEKKPERIAIPNALPGVPAPLALINERLQIPLVPNCPPPAALHTFLSPALLHSYEQRLAWDYQR 133

  Fly   110 --QSHPPASASASATATARSNQAASGYAGEDYGKSMHSTPRSNHHSRHGTSHYNGDQISQQLGSG 172
              |.|..|.|......|.  |.|.  .|.||..........|::.|....|....:::.::   .
  Fly   134 QLQEHFQAQAQLLRQMTL--NPAI--IASEDGSSERSQRSSSSNGSTECCSPTQAEKVEKR---S 191

  Fly   173 AAQHPPVPTTQPQPPPPPPLNGGSGASNGVLYPNAPYTDHGFLQMTLGYLSPSSGTYKSVDPYFL 237
            ......||...|:..|.     |:..|:|    :.| .|..|...|..:       .:..||..|
  Fly   192 QEDRMEVPKKSPEEQPK-----GASKSSG----DTP-LDALFQLSTKNF-------DEEQDPATL 239

  Fly   238 SQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTP 302
               ::|       |....|:               ::||:||.|::.|:..|||||..|:|||..
  Fly   240 ---NIF-------ATRSNPK---------------KKRKSRTAFTNQQIFELEKRFLYQKYLSPA 279

  Fly   303 ERVELATALGLSETQVKTWFQNRRMKHKKQLR--RRDNANEPVDFSRSEPGKQPGEATSSSGDSK 365
            :|.|:|..||||..||.|||||||.|.|:.:.  ::|...|.:....::|.:           |.
  Fly   280 DRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELKKDVQCEKIPDQSADPNR-----------SH 333

  Fly   366 HGKLNPGSVGGTPTQPTSEQQLQMCLMQQGYSTDDYSDLEADSGDEDNSSD 416
            |            ..|...||.|           .|:.:::...|.|...|
  Fly   334 H------------NHPHYHQQHQ-----------HYAHMQSIGSDRDMDKD 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 32/55 (58%)
lblNP_001262805.1 COG5576 206..332 CDD:227863 50/178 (28%)
Homeodomain 252..308 CDD:459649 32/55 (58%)

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