Protein Alignment bsh and Hmx

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_001262674.1
• Gene: Hmx / 42110
• FlyBaseID: FBgn0264005
• Length: 718
• Species: Drosophila melanogaster
• Alignment Length: 544
• Identity: 128/544 - (23%)
• Similarity: 178/544 - (32%)
• Gaps: 192/544 - (35%)

  Fly    10 SPADAHAHANATTPTHSKAAAMASATTMLTTKTPFSIEHILFQNLNSASNNNNSSDTNGIAANT- 73
            |.|..|.:..|:....:.|||:|:|                  ||::.||::|.|...|...:|
  Fly   180 SKALNHNNTCASAAAAAAAAAVAAA------------------NLSNNSNDSNGSSGGGGGKSTT 226

  Fly    74 --NNY--------------APKSS-------------------RNAVKSARSAF----------- 92
              |.:              |.|:.                   ::|...:|..|
  Fly   227 GSNGFTSFSISSILSRSEPAKKNGAAGLITPIPQLPQPGAGGPQDAAMLSRLGFISQWGALAGRY 291

  Fly    93 --------------------AHD----NNPHKHPSQHSHPPQSHPPASASASATATARSNQAASG 133
                                .||    |.....||     |.|..|.:.:.::..||.||||:..
  Fly   292 AALCPPGWPWAPQRLPFHSPTHDSSSTNTTENPPS-----PTSMSPNNNNNNSNTTASSNQASKS 351

  Fly   134 YAGEDYGKSMHSTPRSNHHSRHGTSHYNGDQISQQLGSGAAQHPPV---PTTQPQPPPPPPLNGG 195
                           .:||..|...|..|.|..||......|||..   |..|.|..|..|....
  Fly   352 ---------------PSHHPLHPLYHPLGSQQQQQQQQQHQQHPQQQQHPQQQQQQHPHQPTTPT 401

  Fly   196 SGASNG-----VLYPNAPYT-DHGFLQMTLGYLSPSSGTYKSVD-PYFLSQASLFGGAPFFGAPG 253
            |.:|:|     ..:|:...| .||      |||.|||......: ...:.:.....|.....:|.
  Fly   402 SSSSSGGGSSLTHHPHPHLTGSHG------GYLLPSSSNESDEEGEEIIEEDDGTDGPSDSSSPH 460

  Fly   254 CVPELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQV 318
                     |.|.:.    |::|.|||||..|:..||..|:.:||||:.||..||.:|.|:||||
  Fly   461 ---------GDGNSK----RKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQV 512

  Fly   319 KTWFQNRRMKHKKQLRRRDNA-----------------------------------NEPVDF--- 345
            |.||||||.|.|:||.....|                                   :.|:.:
  Fly   513 KIWFQNRRNKWKRQLAAELEAANMANMAHAAQRLVRVPVLYHDGTTAGFVPPPPPHHHPMQYYAA 577

  Fly   346 -SRSEPGKQP-----------GEATSSSGDSKHGKLNPGSVGGTPTQPTSEQQLQMCLMQQGYST 398
             ..:.|.:.|           ..|..|.....:...:|......|..|...||......:|...|
  Fly   578 ARNTSPPRPPLSSLVXGVGCLATAPMSLLKPPNSMAHPPHPQPPPPAPLHMQQRSFLGCEQLTET 642

  Fly   399 DDYSDLEADSG----DEDNSSDVD 418
            |..||.|.:..    |||.:.||:
  Fly   643 DMDSDSEQERSHMMDDEDAAIDVE 666

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	32/55 (58%)
Hmx	NP_001262674.1	Homeodomain	469..525	CDD:459649	32/55 (58%)