Protein Alignment bsh and bcd

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Alignment Length: 329
• Identity: 82/329 - (24%)
• Similarity: 108/329 - (32%)
• Gaps: 139/329 - (42%)

  Fly    92 FAHDNNP--HKHPSQHSHP-PQSHPPASASASATATARSNQAASGYAGEDYGKSMHSTPRSNHHS 153
            |.|...|  |.||..|||| |.|||                                      |.
  Fly    10 FYHHPLPHTHTHPHPHSHPHPHSHP--------------------------------------HP 36

  Fly   154 RHGTSHYNGDQISQQLGSGAAQHPPVPTTQPQPPP----PPPL--NGGSGASNGVLYPNAPYTDH 212
            .|                   |||     |.|.||    |..|  :..:||.|
  Fly    37 HH-------------------QHP-----QLQLPPQFRNPFDLLFDERTGAIN------------ 65

  Fly   213 GFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVP--ELALGLGMGVNALRHCRRR 275
                            |..:.||..:|         ...|...|  ||...|.|.       |.|
  Fly    66 ----------------YNYIRPYLPNQ---------MPKPDVFPSEELPDSLVMR-------RPR 98

  Fly   276 KARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQL-RRRDNA 339
            :.||.|:..|::.||:.|...|||:.|...:|:..|.|...|||.||:|||.:||.|. :.:|.:
  Fly    99 RTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHKDQS 163

  Fly   340 NEPVDFS---RSEPGKQPGEATSSSGDSKHGKLNPGSV--GGTPTQPTSEQQLQMCLMQQGYSTD 399
            .|.:..|   :...|..|...|.|.|    |...|.::  ..||:.||:            :.|:
  Fly   164 YEGMPLSPGMKQSDGDPPSLQTLSLG----GGATPNALTPSPTPSTPTA------------HMTE 212

  Fly   400 DYSD 403
            .||:
  Fly   213 HYSE 216

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	24/55 (44%)
bcd	NP_788587.1	Homeodomain	106..153	CDD:459649	19/46 (41%)