DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and zen2

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster


Alignment Length:249 Identity:59/249 - (23%)
Similarity:91/249 - (36%) Gaps:79/249 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 VDPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQ 296
            ||.|.:|...::         .|| ||.:............:.:::||.||..||..||:.|...
  Fly    11 VDNYSVSDLMMY---------PCV-ELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLN 65

  Fly   297 RYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRD-----NANEPVDFSRSEPGKQPGE 356
            :||:...|:|::..|.|:|.|||.||||||||.||...|:.     ..:.|:....||..::..:
  Fly    66 KYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKDDQ 130

  Fly   357 -------------ATSSSGDSKHGKLNPGSV---------------------------------- 374
                         .|:......||.|..|.:                                  
  Fly   131 IVERLLRYANTNVETAPLRQVDHGVLEEGQITPPYQSYDYLHEFSPEPMALPQLPFNEFDANWAS 195

  Fly   375 ---GGTPTQPTSEQQLQMCLMQQGYSTDDYSDLEADSGDEDNSS-------DVD 418
               |..||.|.:|..::       ::|.|...::....|.::||       |||
  Fly   196 SWLGLEPTIPIAENVIE-------HNTQDQPMIQNFCWDSNSSSASSSDILDVD 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 27/55 (49%)
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 27/55 (49%)

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