DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and lab

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster


Alignment Length:525 Identity:128/525 - (24%)
Similarity:171/525 - (32%) Gaps:180/525 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LNEASLSPADAHAHANATTPTHSKAAAMASATTMLTTKTPFSIEHILFQNLNSASNNNNSSDTNG 68
            |:.:|.||||::..:::   .||..|..|.||.                    |..:|:|..|..
  Fly   141 LHPSSHSPADSYYESDS---VHSYYATAAVATV--------------------APPSNSSPITAA 182

  Fly    69 IAANTNNYAPKSSRNAVKSARSAFAHDNNPHKHPSQHSHPPQSHPPASASASATATARSNQAASG 133
            .|:.|:|...:..:.|:.|:.:...:.|....:|:..:..| .|..|.......|.......|.|
  Fly   183 NASATSNTQQQQQQAAIISSENGMMYTNLDCMYPTAQAQAP-VHGYAGQIEEKYAAVLHASYAPG 246

  Fly   134 YAGEDYGKSMHSTPRSN--HHSRHGTSHYNGDQISQQLGSGAAQH-------------------P 177
            ...||....|....:|.  ||.:|....|..|.: ..||..|..|                   |
  Fly   247 MVLEDQDPMMQQATQSQMWHHQQHLAGSYALDAM-DSLGMHAHMHHGLPHGHLGNLANNPHQQQP 310

  Fly   178 PVPTTQPQPPPPP--------------------PLNGG-------------------SGASNG-- 201
            .|...|.||...|                    | |||                   :.||||  
  Fly   311 QVQQQQQQPHQQPQHPQNQSPAAHQQHHQNSVSP-NGGMNRQQRGGVISPGSSTSSSTSASNGAH 374

  Fly   202 --------------------------VLYPNAP------------YTDHGFLQMTL--------- 219
                                      |..|.||            |..:|.|.|..         
  Fly   375 PASTQSKSPNHSSSIPTYKWMQLKRNVPKPQAPKLPASGIASMHDYQMNGQLDMCRGGGGGGSGV 439

  Fly   220 --------GYLSPSSGTYKSVDPYFL--SQASLFGGAPFFGAPGCVPELALGLGMGVNALRHC-- 272
                    |..||..|...||....:  :.|:..|.|...|       :.:|||.| :.|..|  
  Fly   440 GNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAAAGSAHPNG-------MGVGLGSG-SGLSSCSL 496

  Fly   273 ---RRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLR 334
               .....||.|::.||:.|||.|...|||:...|:|:|..|.|:|||||.||||||||.||:::
  Fly   497 SSNTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVK 561

  Fly   335 RRDNANEPVD---------FSRSEPGKQ----PGEATSSSGDSKHGKLNPGSVGGTP------TQ 380
               ....|.|         .|...|.:|    |.....|.|....|.........||      |.
  Fly   562 ---EGLIPADILTQHSTSVISEKPPQQQQPQPPELQLKSQGSDLGGNELATGAPSTPTTAMTLTA 623

  Fly   381 PTSEQ 385
            |||:|
  Fly   624 PTSKQ 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 30/55 (55%)
labNP_476613.1 Homeodomain 505..558 CDD:459649 30/52 (58%)

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