Protein Alignment bsh and msx2

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: XP_002936749.1
• Gene: msx2 / 394987
• XenbaseID: XB-GENE-852974
• Length: 256
• Species: Xenopus tropicalis
• Alignment Length: 298
• Identity: 76/298 - (25%)
• Similarity: 107/298 - (35%)
• Gaps: 82/298 - (27%)

  Fly    77 APKSSRNAVKSARSAFAHDNNPHKHPSQHSHPPQSHPPASASASATATARSNQAASGYAGEDYGK 141
            :|:..:..:.|......|   |...||.......|..|.|..| ..|..|..:.|....|.| ..
 Frog     3 SPRKIKEDLSSDEEGQVH---PTLSPSDDHKIKVSSLPFSVEA-LMADKRVPKEAPHLRGVD-AS 62

  Fly   142 SMHSTPRSNHHSRHGTSHYNGDQISQQLGSGAAQHPPVPTTQPQPPPPPPLNGGSG---ASNGVL 203
            :..||||..|                 :|...:..||..|...:.......|...|   :.:|..
 Frog    63 AAGSTPRHLH-----------------MGIRDSPSPPGLTKTFETSSVKSENSEDGTTWSKDGGS 110

  Fly   204 YPNAPYTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNA 268
            |...|           .:||||:.|.:
 Frog   111 YSPPP-----------RHLSPSTCTLR-------------------------------------- 126

  Fly   269 LRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKK-- 331
             :|...||.||.|:..||..||::|..::|||..||.|.:::|.|:|||||.||||||.|.|:
 Frog   127 -KHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQ 190

  Fly   332 --QLRRRDNANEPV---DFSRSEPGKQPGEATSSSGDS 364
              ::.:...|.:|:   .||...|...|.:|.|..|.|
 Frog   191 EAEIEKLKMAAKPILPPGFSIPFPINSPIQAASLYGSS 228

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	30/55 (55%)
msx2	XP_002936749.1	Homeodomain	132..188	CDD:459649	30/55 (55%)