DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and ventx2

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_988862.1 Gene:ventx2 / 394456 XenbaseID:XB-GENE-919664 Length:333 Species:Xenopus tropicalis


Alignment Length:309 Identity:88/309 - (28%)
Similarity:125/309 - (40%) Gaps:74/309 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 NSSDTNG---IAANTNNYAPKSSRNAVKSARSAFAHDNNPHKHPSQHSHPPQSHP--------PA 115
            |:..|.|   .|.::..:..:|||.:.|...|......:|:..||..|......|        |.
 Frog     2 NTRTTTGKMTKAFSSVEWLAQSSRRSHKEQPSKGDQRYSPYPSPSLPSWNSDVSPSSWNSQLSPV 66

  Fly   116 SASASATATARSNQAASG-----YAGEDYG----KSMH--STPRSNH--HSRHGTSHYNGDQISQ 167
            :.||..:....|.|.:|.     |:.||..    |.::  |||..|.  |....|..|:| .:| 
 Frog    67 AGSAQVSPCPGSAQYSSDSELSLYSNEDEDLFCEKDLNTPSTPGDNGLLHRDTATHEYSG-MVS- 129

  Fly   168 QLGSGAAQHPPVPTTQPQPPPPPPLNGGSGASNGVLYPNAPYTDHGFLQMTLGYLSPSSGTYKSV 232
                       ||...|:     ..:....|.:|  |..:  ||.|:....    |.||.|....
 Frog   130 -----------VPANTPR-----TTSNEDAAKSG--YSTS--TDSGYESEA----SRSSSTAPEG 170

  Fly   233 DPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQR 297
            |    :..||        :|....:....||           |:.||.|:..|:|.|||.|:..|
 Frog   171 D----ATVSL--------SPNDTSDEEGKLG-----------RRLRTAFTSDQISTLEKTFQKHR 212

  Fly   298 YLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLR-RRDNANEPVDF 345
            ||...||.:||..|.|||.|:||||||||||:|:::: .|.::..|..|
 Frog   213 YLGASERRKLAAKLQLSEVQIKTWFQNRRMKYKREIQDGRPDSYHPAQF 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 32/55 (58%)
ventx2NP_988862.1 Homeodomain 190..246 CDD:459649 32/55 (58%)

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