DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and Noto

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001007473.1 Gene:Noto / 384452 MGIID:3053002 Length:240 Species:Mus musculus


Alignment Length:177 Identity:51/177 - (28%)
Similarity:75/177 - (42%) Gaps:48/177 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 SSGT----YKSVDPYFLSQASLFGGAPFFGAPGCVPELAL-----GLGMGVNALRHC-------- 272
            |:|:    |.||..|.|...|            |||.|.:     ||.:..:.|.:|        
Mouse    84 STGSWLPAYLSVGVYPLCSMS------------CVPGLNVTHHQQGLRLTGSELPYCLGPLKWAP 136

  Fly   273 -----------RRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRR 326
                       ..::.||.|:..||..|||.|..|..|...||.:||..|.|:|.||:.||||||
Mouse   137 TVDLRDHGTERHTKRVRTTFNLQQLQELEKVFAKQHNLVGKERAQLAARLHLTENQVRIWFQNRR 201

  Fly   327 MKHKKQLRRRDNANEPVDFSRSEPGKQPGEATSSSGDSKHGKLNPGS 373
            :|::||        :.:....|...::|..::..:..|:..:|..||
Mouse   202 VKYQKQ--------QKLKLPSSSVMEEPSSSSDGNIQSEDAELGIGS 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 27/55 (49%)
NotoNP_001007473.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Homeodomain 150..206 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 208..240 4/31 (13%)
Blue background indicates that the domain is not in the aligned region.

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