Protein Alignment bsh and lms

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 252
• Identity: 62/252 - (24%)
• Similarity: 87/252 - (34%)
• Gaps: 105/252 - (41%)

  Fly   267 NALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKK 331
            |.|...|:::.||.||..|:..||..||..:|||..:|..||..|.|:|||:|.||||||.|.|:
  Fly    79 NGLGDDRKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKR 143

  Fly   332 ---------------QLRRRDNANEPVD------FSRSEPGKQP---------------GEATSS 360
                           ||.....|...|.      ||::..|..|               ..||::
  Fly   144 KYTSDVETLASHYYAQLGIGGLARPMVVGDRLWLFSQTPTGPTPIQSIMLNGSGSAAPMASATTA 208

  Fly   361 SGDSKHGKLNPGSV------------------------------------GGTP----------- 378
            :|.........|.:                                    ||.|
  Fly   209 TGSPMRPYATSGGMPPLPGPSVMESARNAILARGQPLNFALPFGVAKPPAGGVPAASYIPRCKPY 273

  Fly   379 ---------TQPTSEQQLQMCLMQQGYSTDDYSDL--EADSGDEDNSSDVD-IVGDA 423
                     :.||:|..|||          .|:.|  ||:||..:..:::: :.|||
  Fly   274 ATSYVDYAASLPTNESYLQM----------KYATLPPEAESGASNGLAELERVFGDA 320

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	28/55 (51%)
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	10/26 (38%)
		Homeodomain	87..143	CDD:459649	28/55 (51%)