Protein Alignment bsh and Nkx2-4

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: XP_038962557.1
• Gene: Nkx2-4 / 366213
• RGDID: 1304985
• Length: 353
• Species: Rattus norvegicus
• Alignment Length: 385
• Identity: 95/385 - (24%)
• Similarity: 136/385 - (35%)
• Gaps: 119/385 - (30%)

  Fly    42 TPFSIEHIL---------FQNLNSASNNNNSSDTNGIAANTNNYAPKSSRNAVKSARSAFAHDNN 97
            ||||:..||         |..:...:.....:.....|.......|.|...||...:
  Rat     9 TPFSVSDILSPIEETYKKFGGVMDGAPPGLGAPLGAAAYRAPPTGPSSQAAAVAGMQ-------- 65

  Fly    98 PHKHPSQHSHPPQSHPPASASASATATARSNQAASGYAGEDYGKSMHSTPRSNH--HSRHGTSHY 160
                      ||.:....:|:|:|.|.|.:..||:.|         |..|..:.  ||..| |:.
  Rat    66 ----------PPHAMAGHNAAAAAAAAAAAAAAAATY---------HMPPGVSQFPHSAMG-SYC 110

  Fly   161 NGDQISQQLGSGAAQHPPVPTTQPQPPPPPPLNGGSGASNGVLYPNAPYTDHGFLQMTLGYLSPS 225
            ||       |.|.....|..|        ..:.||:.|:....|  ...||..:..:: .::.||
  Rat   111 NG-------GLGNMGELPAYT--------DGMRGGAAAAATGWY--GANTDPRYSSIS-RFMGPS 157

  Fly   226 S-------GTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKARTVFSD 283
            :       |:...:.....|.|.|...||                          |||.|.:||.
  Rat   158 AGVNVAGMGSLTGIADAAKSLAPLHAAAP--------------------------RRKRRVLFSQ 196

  Fly   284 PQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNANEPVDFSRS 348
            .|:..||:||:.|:|||.|||..||:.:.|:.||||.||||.|.|.|:|  .:|.|.:.:   :.
  Rat   197 AQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ--AKDKAAQQL---QQ 256

  Fly   349 EPGKQP--------------------GEATSSSGDSKHGKLNPGSVGGTPTQPTSEQQLQ 388
            |.|..|                    |:...:..    |...||..|..|..||...:|:
  Rat   257 EGGLGPPPPPPPPSPRRVAVPVLVKDGKPCQNGA----GTPTPGQGGQQPQAPTPASELE 312

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	30/55 (55%)
Nkx2-4	XP_038962557.1	Homeodomain	188..244	CDD:459649	30/55 (55%)