DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and PDX1

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_000200.1 Gene:PDX1 / 3651 HGNCID:6107 Length:283 Species:Homo sapiens


Alignment Length:272 Identity:74/272 - (27%)
Similarity:102/272 - (37%) Gaps:78/272 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 AAQHPPVPT------------TQPQPPPPPPLNGGSGASNGVLYPN-APY-----TD-------H 212
            |.|..|.|.            .||.||||.|..|..||......|: :||     .|       |
Human    19 AFQRGPAPEFSASPPACLYMGRQPPPPPPHPFPGALGALEQGSPPDISPYEVPPLADDPAVAHLH 83

  Fly   213 GFLQMTLGYLSPSSGTY-KSVDPYFL---------------SQASLFGGAPFFGAPGCVPELALG 261
            ..|...|....|.:|.: :..:|..|               ::|..:.|....||....||    
Human    84 HHLPAQLALPHPPAGPFPEGAEPGVLEEPNRVQLPFPWMKSTKAHAWKGQWAGGAYAAEPE---- 144

  Fly   262 LGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRR 326
                       ..::.||.::..||..|||.|...:|:|.|.|||||..|.|:|..:|.||||||
Human   145 -----------ENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRR 198

  Fly   327 MKHKKQLRRRDNANEPV------------------DFSRSEPGKQPGEATSSSGD--SKHGKLNP 371
            ||.||:..::......|                  :.....|...||.|...:..  ::.|:|.|
Human   199 MKWKKEEDKKRGGGTAVGGGGVAEPEQDCAVTSGEELLALPPPPPPGGAVPPAAPVAAREGRLPP 263

  Fly   372 GSVGGTPTQPTS 383
            | :..:| ||:|
Human   264 G-LSASP-QPSS 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 28/55 (51%)
PDX1NP_000200.1 Transactivation domain. /evidence=ECO:0000250 13..73 17/53 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..71 13/36 (36%)
Antp-type hexapeptide 118..123 0/4 (0%)
Homeodomain 147..203 CDD:459649 28/55 (51%)
Nuclear localization signal. /evidence=ECO:0000250 197..203 4/5 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..283 15/75 (20%)

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