Protein Alignment bsh and Hmx1

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_001101833.2
• Gene: Hmx1 / 360960
• RGDID: 1304928
• Length: 333
• Species: Rattus norvegicus
• Alignment Length: 335
• Identity: 93/335 - (27%)
• Similarity: 117/335 - (34%)
• Gaps: 103/335 - (30%)

  Fly    42 TPFSIEHILFQNLNSASNNNNSSDTNGIAANTNNYAPKSSRNAVKSARSAFAHDNNPHKHPSQHS 106
            ||......|.:||.:|                         .|..|.|:  |..:...:...:..
  Rat    12 TPARASSFLIENLLAA-------------------------EAKGSGRA--AQGDGVREEEEEDD 49

  Fly   107 HPPQSHPPASASASATATARSNQAASGYAGEDYGKSMHSTPRSNHHSRHGTSHYNGDQISQQLGS 171
            ..|:...|..|........|..:|.||..||...:::...||
  Rat    50 DDPEDEDPEQARRRRLQRRRQQRAGSGPGGEARARALGLGPR----------------------- 91

  Fly   172 GAAQHPPVPTTQPQPPPPPPLNGGSGASNGVLYPNAPYTDHGFLQMTLGYLSPSSGTYKSVDPYF 236
                        |.|.|.||...|.|.:.. .||.| ...:|      |.|||.:....|.:
  Rat    92 ------------PPPGPGPPFALGCGGATR-WYPRA-QGGYG------GGLSPDTSDRDSPE--- 133

  Fly   237 LSQASLFGGA----PFFGAPGCVP----------------ELALGLGMGVNA---LRHCRRRKAR 278
              .....|.|    |....||.||                |||....:...|   .|..||:|.|
  Rat   134 --TGEDMGRAESAWPRCPGPGAVPREVTTQGPAAGGEEAAELAEAPAVAAAAAGEARGGRRKKTR 196

  Fly   279 TVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNANEPV 343
            ||||..|:..||..|:.:||||:.||..||.:|.|:|||||.||||||.|.|:||     |.|..
  Rat   197 TVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKWKRQL-----AAELE 256

  Fly   344 DFSRSEPGKQ 353
            ..|.|.||.|
  Rat   257 AASLSPPGAQ 266

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	32/55 (58%)
Hmx1	NP_001101833.2	Homeodomain	193..249	CDD:459649	32/55 (58%)