DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and unpg

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster


Alignment Length:508 Identity:118/508 - (23%)
Similarity:171/508 - (33%) Gaps:181/508 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 HSKAAAMASATTMLTTK---TPFSIEHILFQNLNSASNNNNSSDTNGIAANTNNYAPKSSRNAVK 86
            :.:...|.|.||.|.:|   .|||||.::       :|...::.|........:...::.:....
  Fly     9 NGEIGTMESPTTRLASKPFPKPFSIESLI-------ANQTPATATPPSPPEERDQEQEAEQEQEL 66

  Fly    87 SARSAFA-----------------------HD-------------NNPHKHPSQHS-------HP 108
            |||:..|                       |:             ::|..||:...       .|
  Fly    67 SARAMVASSALGLTQFPLYNPWLHGYFAQNHERLTHLIAGGCYLPSSPAGHPAAQQPQAQAQPQP 131

  Fly   109 PQSHPPASASASA----------TATARSNQAASGYA-------------GEDYGKSMHSTPRSN 150
            |..|||..|....          |.....|.||:|.|             .:||..|:....|..
  Fly   132 PPPHPPTHALEKQLPPTLPHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQ 196

  Fly   151 HHSRHGTSHYNGDQISQQLGSGAAQHPPVPTTQPQPPPPPPLNGGSGASNGVLYPNAPYTDHGF- 214
            |.:..|..|      ..|...|.|        |.|.|.||..: .|.|.:|...|..|..|.|. 
  Fly   197 HMAAAGRMH------EDQANPGMA--------QLQEPTPPQAH-SSPAKSGSHSPMEPALDVGMD 246

  Fly   215 ------------LQMTL------GYLSPS-SGTYKSVDPYFLS-----QASLFGGAPFFGAPGCV 255
                        :.:|:      |.:..| :|.|.:.|....|     |:...||          
  Fly   247 EDFECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGG---------- 301

  Fly   256 PELALGLG----MGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSET 316
                 |:|    .|..:..:.:.|:.||.|:..||..||:.|..::|||..||.::||:|.|||.
  Fly   302 -----GMGGKDSQGNGSSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEV 361

  Fly   317 QVKTWFQNRRMKHKKQLRRRDNANEPVDFSRSEPGKQPGEATSSSGDSKHGKLNPGSVGGT---- 377
            |||.||||||.|.|:                           ..:|.:.||....|:..||    
  Fly   362 QVKIWFQNRRAKWKR---------------------------VKAGLTSHGLGRNGTTSGTKIVV 399

  Fly   378 --PTQ------PTSEQQLQ-MCL------MQQGYSTDDYSDLEADSGDEDNSS 415
              |..      .:..|||: |||      :::..|.:.....|..||..:.||
  Fly   400 PIPVHVNRFAVRSQHQQLEKMCLSGPKPDLRKKLSAEAIGGFEKFSGSTNASS 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 30/55 (55%)
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 28/51 (55%)

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