Protein Alignment bsh and scro

DIOPT Version :10

• Sequence 1: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Sequence 2: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Alignment Length: 395
• Identity: 104/395 - (26%)
• Similarity: 148/395 - (37%)
• Gaps: 115/395 - (29%)

  Fly    99 HKHPSQHSHPPQSHPPASASASATATARSNQAASGYAGEDYG-KSMHSTPRSNHHSRHGTSHYNG 162
            |...||| |...:....:.:.::|....|..||:..|...:. .|:|..  .|.||:|.::.:|.
  Fly    49 HTAISQH-HQVDTSTKLNTNETSTQNTVSTAAAAAVAHHHHNLSSIHHL--QNLHSQHQSTLFNS 110

  Fly   163 DQISQQLGSGAAQHPPVPTTQPQPP-------------PPPPLNGGSGASN----GVLYPNA--- 207
            :..:           |...|....|             ||.|....|.:|:    |.|..:.
  Fly   111 NHST-----------PFSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSINSPGTLTTSTMAN 164

  Fly   208 PYTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFG-------GAPFFGAPGCVPELALGLGMG 265
            ||.      |...|.||...||  ..|  ....||.|       .|.::|:....|..|:...|.
  Fly   165 PYA------MGTLYHSPGVQTY--CGP--TDNLSLAGHYTDMRNSASWYGSTANDPRFAISRLMS 219

  Fly   266 VNA------------LRHC-------------RRRKARTVFSDPQLSGLEKRFEGQRYLSTPERV 305
            .:|            |..|             :|||.|.:|:..|:..||:||:.|||||.|||.
  Fly   220 SSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQRYLSAPERE 284

  Fly   306 ELATALGLSETQVKTWFQNRRMKHKKQLRRRDNA-----NEPVDFSRS-------EPGKQPGEAT 358
            .||:.:.|:.||||.||||.|.|.|:|.:.:..|     |:|....|.       :.||......
  Fly   285 HLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRRVAVPVLVKDGKPCSGNN 349

  Fly   359 SSSGDSKHGKLNPGSVGGTPTQPTSEQQLQMCLMQQGYSTDDYSDLEADSGDEDNSSDVD----- 418
            |||...:||           |..||          .|.:|...::..|:||....:::|.
  Fly   350 SSSQSQQHG-----------TNSTS----------AGNNTGSANNGNANSGIVSVTANVSGGLNL 393

  Fly   419 IVGDA 423
            |.|||
  Fly   394 ITGDA 398

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	30/55 (55%)
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	30/55 (55%)