DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and HOXD4

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_055436.2 Gene:HOXD4 / 3233 HGNCID:5138 Length:255 Species:Homo sapiens


Alignment Length:241 Identity:68/241 - (28%)
Similarity:88/241 - (36%) Gaps:62/241 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 GYAGEDYGKSMHSTPRSNHHSRHG--TSHYNGDQISQQLGSGAAQHPPVPTTQPQPPPPPPLNGG 195
            |.:|...|.::   |...|....|  ..||            ||...|.|.  |..|||.||.|.
Human    63 GGSGPGPGSAL---PARGHGQEPGGPGGHY------------AAPGEPCPA--PPAPPPAPLPGA 110

  Fly   196 SGASNGVLYPNAPYTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELAL 260
            ...|..  .|..|.:.....|..:.|.........||:|.:.      ||.|             
Human   111 RAYSQS--DPKQPPSGTALKQPAVVYPWMKKVHVNSVNPNYT------GGEP------------- 154

  Fly   261 GLGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNR 325
                          :::||.::..|:..|||.|...|||:...|:|:|..|.|||.|:|.|||||
Human   155 --------------KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNR 205

  Fly   326 RMKHKKQLRRRDNANEPVDFSRSEPGKQPGEATSSSGDSKHGKLNP 371
            |||.||..:.      |....||.........:||...|:|  |.|
Human   206 RMKWKKDHKL------PNTKGRSSSSSSSSSCSSSVAPSQH--LQP 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 27/55 (49%)
HOXD4NP_055436.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..127 22/82 (27%)
Antp-type hexapeptide 133..138 1/4 (25%)
Homeodomain 155..211 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..255 9/40 (23%)

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