DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and HOXD3

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_008829.3 Gene:HOXD3 / 3232 HGNCID:5137 Length:432 Species:Homo sapiens


Alignment Length:320 Identity:92/320 - (28%)
Similarity:122/320 - (38%) Gaps:66/320 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 HSHPPQSHPPASASASATATARSNQAASGYAGEDYGKSMHSTPRSNHH-SRHGTSHYNGDQISQQ 168
            :|.|.|.:|| .|:||:..|.....|.|..:........|.....|.. .|.||.:..|      
Human    43 YSTPHQPYPP-PAAASSLDTDYPGSACSIQSSAPLRAPAHKGAELNGSCMRPGTGNSQG------ 100

  Fly   169 LGSGAAQHPPVPTTQ--PQPPPPPPL---------NGGSGASNGVLYPNAPYTDHGFLQMTLGYL 222
             |.|.:|.|.:.:.|  ||||||||.         .||..|......|||..:.....:....::
Human   101 -GGGGSQPPGLNSEQQPPQPPPPPPTLPPSSPTNPGGGVPAKKPKGGPNASSSSATISKQIFPWM 164

  Fly   223 SPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKARTVFSDPQLS 287
            ..|....|..:....:..|....:|    ||..                  .::.||.::..||.
Human   165 KESRQNSKQKNSCATAGESCEDKSP----PGPA------------------SKRVRTAYTSAQLV 207

  Fly   288 GLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNANEPVDFS--RSEP 350
            .|||.|...|||..|.|||:|..|.|:|.|:|.||||||||:||..:.:...:.|...|  ||.|
Human   208 ELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPERSPP 272

  Fly   351 -GKQPGEATSSSGDSKHGKLN--PGSVGGTPTQPTSEQQ-------------LQMCLMQQ 394
             |...|....|      |:|.  ||.....|:.|...:.             |..||.||
Human   273 LGGAAGHVAYS------GQLPPVPGLAYDAPSPPAFAKSQPNMYGLAAYTAPLSSCLPQQ 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 29/55 (53%)
HOXD3NP_008829.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..62 8/19 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..197 32/157 (20%)
Antp-type hexapeptide 160..165 0/4 (0%)
Homeodomain 195..251 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..280 7/26 (27%)
DUF4074 369..430 CDD:463833
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..432
Blue background indicates that the domain is not in the aligned region.

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