DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsh and HOXC12

DIOPT Version :10

Sequence 1:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_776272.1 Gene:HOXC12 / 3228 HGNCID:5124 Length:282 Species:Homo sapiens


Alignment Length:185 Identity:59/185 - (31%)
Similarity:78/185 - (42%) Gaps:40/185 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 GSGAAQHPPVPTTQPQPPPPPPL---------NGGSGASNGVLYPNAPYTDHGFLQMTLGYLSPS 225
            |.|||..|      .:|..||.|         .||.....|...|:.|               ||
Human   119 GPGAALLP------LEPSGPPALGFKYDYAAGGGGGDGGGGAGPPHDP---------------PS 162

  Fly   226 SGTYKS-VDPYFLSQASLFGGAPFFGAPG-CVPELALGLGMGVNALR----HCRRRKARTVFSDP 284
            ..:.:| .....|::.:...||   |.|| .|..|..|.|:..:...    :.|.||.|..:|..
Human   163 CQSLESDSSSSLLNEGNKGAGA---GDPGSLVSPLNPGGGLSASGAPWYPINSRSRKKRKPYSKL 224

  Fly   285 QLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNA 339
            ||:.||..|....:::...|.||:..|.||:.|||.|||||||| ||:|..|:.|
Human   225 QLAELEGEFLVNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMK-KKRLLLREQA 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bshNP_477350.2 Homeodomain 275..331 CDD:459649 26/55 (47%)
HOXC12NP_776272.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 94..129 5/15 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..214 17/84 (20%)
Homeodomain 215..271 CDD:459649 27/56 (48%)

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